Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03611 ATGGGATTAGGACTGTTTAAGGCGTTATTTTGTTGTACAACAAAGTCCCAAGACATTCCCATTATATCCTCATCACCAGATTCATCACCTAAGCATAATAGCTATGGCCACATACAACCAACAAATTCATCTTCTTATACAAATAATTCAAAAATTGGACCTATTCTAGGAAAACCATATGTTGTGATAAATCAAATATACGAAATGAAGAAAGAACTTGGAAGAGGTCAATCAGGTGTGACATATCTATGTGTAGAGAAGATAACAGGGAGAGAGTACGCATGCAAATCGATAGCGAGGTCGAAACTGTTGAGCGAACAAGAGATAGATGATGTGAAAAGAGAAGTTATGATTCTGCAACATCTTTCGGGGCAACCAAACATAGTTGAATTCAGAGGAGCTTATGAGGACAAACAGAACGTGTATTTGGTCATGGAATTGTGTAAAGGAGGTGAATTATTTGATACAATTATTGCTAAAGGGAATTACACAGAATCTGAAGCTGCTAGCATTATGAGACAGATTGTCAATGTTGTTCATGTCTGTCATTTCATGGGTGTTATACATCGTGATCTTAAGCCTGAGAATTTCTTGCTTGCTTCACGTCTTCCTAATTCTGCTCTTAAAGCTACTGATTTTGGACTCTCCATTTTCCTTGAAGAAGGTAAAGTATATAAAGAGATCGTTGGAAGTGCATATTATGTGGCTCCAGAGGTGTTAAAACGGAGTTATGGAAAGGAGATCGATATATGGAGTGCAGGAATCATTTTATACATTCTCCTAAGTGGGGTGCCTCCATTTTGGGCTGAAACCGAAAAAGGCATATTTGAAGCTATTTTGGGAGGTAAGCTCGATCTGGAGATGGCACCATGGCCTTCTATTTCAGCTTCTGCAAAAGATTTGATCAGGAAAATGTTGGCTTATGACCCTAAGAAACGCATTACAGCTTCTGATGCACTTGAACACCCATGGATGAAGGAAGGTGGTGAGGCATCAGACAAGCCTTTAGACAATGCTGTTTTAATTAGGATGAAACAGTTCAGAGCAATGAACAAGATGAAGAAACTTGCTTTAAAGGTAATAGCGGAAAACCTTTCAGATGAGGAAATAAAGGGCTTGAAACAAATGTTCAACAATATGGATACTGATCGAAGCGGTACAATTACATATGAAGAACTAAAATCTGGACTGTCCAAATTGGGATCCAAGCTAAGTGAATCTGAAATAAAGCAGCTAATGGACGGTGCTGACGTTGACAAGAATGGAACTATTGACTACCATGAATTCATTACTGCAACTATAAACCGGCATAAACTTGAGAGGGAAGAGAATTTGTTCAAGGCTTTTCAATACTTTGACAAGGATAACAGCGGTTATGTAACAAGAGAGGAGCTTAGACAAGCTTTGGCTGAATATCAAATGGGAGATGAGGCTACTATAGATGAAGTCATTGATGATGTTGACACTGACAATGATGGGAGAATTAATTACCAGGAGTTTGTAGCTATGATGAAGAAGGGGACCTTGGATAATTATGAGAAAGAGAAACCACGATAA 1557 0.3847 MGLGLFKALFCCTTKSQDIPIISSSPDSSPKHNSYGHIQPTNSSSYTNNSKIGPILGKPYVVINQIYEMKKELGRGQSGVTYLCVEKITGREYACKSIARSKLLSEQEIDDVKREVMILQHLSGQPNIVEFRGAYEDKQNVYLVMELCKGGELFDTIIAKGNYTESEAASIMRQIVNVVHVCHFMGVIHRDLKPENFLLASRLPNSALKATDFGLSIFLEEGKVYKEIVGSAYYVAPEVLKRSYGKEIDIWSAGIILYILLSGVPPFWAETEKGIFEAILGGKLDLEMAPWPSISASAKDLIRKMLAYDPKKRITASDALEHPWMKEGGEASDKPLDNAVLIRMKQFRAMNKMKKLALKVIAENLSDEEIKGLKQMFNNMDTDRSGTITYEELKSGLSKLGSKLSESEIKQLMDGADVDKNGTIDYHEFITATINRHKLEREENLFKAFQYFDKDNSGYVTREELRQALAEYQMGDEATIDEVIDDVDTDNDGRINYQEFVAMMKKGTLDNYEKEKPR 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03611 518 ProSitePatterns EF-hand calcium-binding domain. 417 429 IPR018247 -
Car04g03611 518 ProSiteProfiles EF-hand calcium-binding domain profile. 476 510 IPR002048 GO:0005509
Car04g03611 518 PANTHER SERINE/THREONINE-PROTEIN KINASE 33 511 - -
Car04g03611 518 Gene3D Transferase(Phosphotransferase) domain 1 153 332 - -
Car04g03611 518 Pfam EF-hand domain pair 373 433 IPR002048 GO:0005509
Car04g03611 518 Pfam EF-hand domain pair 442 505 IPR002048 GO:0005509
Car04g03611 518 ProSitePatterns EF-hand calcium-binding domain. 488 500 IPR018247 -
Car04g03611 518 Gene3D - 333 510 - -
Car04g03611 518 ProSitePatterns EF-hand calcium-binding domain. 381 393 IPR018247 -
Car04g03611 518 SMART efh_1 372 400 IPR002048 GO:0005509
Car04g03611 518 SMART efh_1 408 436 IPR002048 GO:0005509
Car04g03611 518 SMART efh_1 479 507 IPR002048 GO:0005509
Car04g03611 518 SMART efh_1 444 472 IPR002048 GO:0005509
Car04g03611 518 SUPERFAMILY EF-hand 364 505 IPR011992 -
Car04g03611 518 ProSitePatterns Protein kinases ATP-binding region signature. 73 96 IPR017441 GO:0005524
Car04g03611 518 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
Car04g03611 518 SUPERFAMILY Protein kinase-like (PK-like) 67 332 IPR011009 -
Car04g03611 518 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 29 33 511 - -
Car04g03611 518 SMART serkin_6 67 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g03611 518 ProSiteProfiles EF-hand calcium-binding domain profile. 368 403 IPR002048 GO:0005509
Car04g03611 518 ProSiteProfiles Protein kinase domain profile. 67 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g03611 518 Pfam Protein kinase domain 67 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g03611 518 Gene3D Phosphorylase Kinase; domain 1 69 152 - -
Car04g03611 518 ProSitePatterns EF-hand calcium-binding domain. 453 465 IPR018247 -
Car04g03611 518 CDD STKc_CAMK 67 324 - -
Car04g03611 518 MobiDBLite consensus disorder prediction 22 46 - -
Car04g03611 518 ProSiteProfiles EF-hand calcium-binding domain profile. 404 439 IPR002048 GO:0005509
Car04g03611 518 ProSiteProfiles EF-hand calcium-binding domain profile. 440 475 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03611 Car-Chr4 65564907 65569500 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Car04g03611 Pkinase 2.7e-75 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03611 04 65564907 65569500 Car04g03611 04 65564907 65569500 ECH