Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03604 ATGGTTAGCACTCCTAAATCTTCATCTAATAACCACTCTCCGACAAGTGCTCCGTCATCGGCGACTTCTGGTGACACCAACAACCCTAGTTTCATGCGAAAAACTCTTCCTTCTCCTTGGGCTCAGGTTGTCCGTGGTGGCGAGACAGAATCACCCACCGGCATTCATCAATCACTGCCGTCATCATCGTCATCTTCCTCCTCCTCTCTGACAACAGGCGCCAACGACCAAGCTCCGTCGTCTGATTGTTCCCCAAAGGCGGTTTCTACTCCGCCGTTGGTGGACAACTTAATTACGATAGCCTCCGATGTTAGTGATGGCAATGCAGGTCATTCTAAGAAATCCGTATGGAACAAACCCTCAAACGGCGTCGTTGAGACTGGTCCTGTAATGGGTGCTGAATTGTGGCCTGCTTTGTCTGAATCCACCAAATTTTCTGGTAAATTGCCAGCTGAATCTTCCCCTAAGACTGCTGCTGTTGATGGATCACCTTCTACTTCTCAGGGGTCTGTAATTTCACACCCACCTCAGAGACAAGGTACTAGTAACACAAAATTTAGTTCGGCAACAATCTATAATATGCAAAATAGACCAAGACCCGTGAAGAGGGTTGCTGGCGTCAACGTTGGACCTGGTCCTGTTCAGGGAAACTTCTCCAGCCCTCCTACTCCTCCACCACTGCCTCCTTTTCCTATATATCAACTCACTCCAGGTAGCTACGGGAATATGGGGCCAAGTATATCCGACTCTTCTTCAAGATATCATTACCGGAACAATAACTGCGACGCAAGACCATTAGTTGGTGATTCCTCTCGCAGAAGTAATTTTGGGTCCCATCCACGAGGAAATAATTTCTATCATCAGAATACTTATAGTAAAGATCGTGGAAATAGAGATTCTCATGCAcctcaacaaaggatgcttcccagaggattattgaggcaccCACCACCTGGTCCTGCTGCATTTTTGGGTCCTCAGCCAATTGGACCATTTCCAAACCAAGTTGCTTATCCTGAGTTGTATTACTTTCCAACAGTAACGATGGATCCCTTTAGGGGTATGCCGTTCTTCCCCCACAGCCCTTCCCCGGCAACATTCTTCCCTGCGGCAGAATCTCCTCTGTCCAATATGATAGTCAATCAGATTGACTATTATTTCAGTGATACTAATTTAATAAAAGATGAGTTTTTAAGATCCAATATGGACGAAGAGGGTTGGGTTCCAATTACCTTGATAGCAAACTTCCCTCGAGTTAGAAATTTGACAAGTAACGTTCAGTTGATATTGGATTCGTTGAGAGGTTCAACTGTTGTGGATGTTCATGATGACAAATTGAGGAGGCGTAATGATTGGATGAATTGGTTGCCCTCTAGTCAAGTCAAGATTGAATCTAGTTCAGTTTCAAGTGGATCAAGATACAGTAACTTGACCGATGATTTTCAAACTATCACTCTGGAAAAAACAACTCGTGAAGATGAAGGTGAGTCTTCTCGTCAGTCTCCACTTTCAAATGGAAGTGAGGATGCGGGTAACGTCAAttaa 1545 0.4369 MVSTPKSSSNNHSPTSAPSSATSGDTNNPSFMRKTLPSPWAQVVRGGETESPTGIHQSLPSSSSSSSSSLTTGANDQAPSSDCSPKAVSTPPLVDNLITIASDVSDGNAGHSKKSVWNKPSNGVVETGPVMGAELWPALSESTKFSGKLPAESSPKTAAVDGSPSTSQGSVISHPPQRQGTSNTKFSSATIYNMQNRPRPVKRVAGVNVGPGPVQGNFSSPPTPPPLPPFPIYQLTPGSYGNMGPSISDSSSRYHYRNNNCDARPLVGDSSRRSNFGSHPRGNNFYHQNTYSKDRGNRDSHAPQQRMLPRGLLRHPPPGPAAFLGPQPIGPFPNQVAYPELYYFPTVTMDPFRGMPFFPHSPSPATFFPAAESPLSNMIVNQIDYYFSDTNLIKDEFLRSNMDEEGWVPITLIANFPRVRNLTSNVQLILDSLRGSTVVDVHDDKLRRRNDWMNWLPSSQVKIESSSVSSGSRYSNLTDDFQTITLEKTTREDEGESSRQSPLSNGSEDAGNVN 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03604 514 PANTHER LA-RELATED PROTEIN 1B 6 503 - -
Car04g03604 514 MobiDBLite consensus disorder prediction 1 35 - -
Car04g03604 514 Pfam La domain 379 434 IPR006630 -
Car04g03604 514 MobiDBLite consensus disorder prediction 103 128 - -
Car04g03604 514 MobiDBLite consensus disorder prediction 484 514 - -
Car04g03604 514 MobiDBLite consensus disorder prediction 499 514 - -
Car04g03604 514 SUPERFAMILY "Winged helix" DNA-binding domain 368 457 IPR036390 -
Car04g03604 514 MobiDBLite consensus disorder prediction 143 184 - -
Car04g03604 514 MobiDBLite consensus disorder prediction 103 122 - -
Car04g03604 514 MobiDBLite consensus disorder prediction 51 87 - -
Car04g03604 514 MobiDBLite consensus disorder prediction 158 184 - -
Car04g03604 514 SMART la 373 451 IPR006630 -
Car04g03604 514 MobiDBLite consensus disorder prediction 263 303 - -
Car04g03604 514 Gene3D - 369 459 IPR036388 -
Car04g03604 514 MobiDBLite consensus disorder prediction 1 91 - -
Car04g03604 514 MobiDBLite consensus disorder prediction 271 291 - -
Car04g03604 514 ProSiteProfiles La-type HTH domain profile. 369 458 IPR006630 -
Car04g03604 514 PANTHER LUPUS LA PROTEIN-RELATED 6 503 IPR045180 -
Car04g03604 514 CDD LAM 377 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03604 Car-Chr4 65496872 65501004 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03604 04 65496872 65501004 Car04g03604 04 65496872 65501004 ECH
Car04g03604 04 65496872 65501004 Car05g03284 05 77578462 77581973 PCT