Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03586 ATGTCTGTTTCTGTTTCTGTTACCGTTCCCTCTGTCGTGGGCCCCTTTCTTTCCCAATCCCGCCGGCGGTTGCGGCGATCGACGACTGCCCTCCGATCCGATACGGTGTCCGTTGGCCCAGCCAGATTATTGAGGAAACTAAAACAAGAGTGTGGCACTCCTCTGCCCCTTCTTCAGTATGTGGCCGATACCATGTCCTCTGAAATGCGGGCCGGGCTTGCCTCCTATGATGGGCCTGGGCTTCCCATGATACCCATTATGAATGAGAAAGGATTGTTTTATGCTTTAGACCTTGGTGGAACCAACTTTCGTGTGTTGAGAGTGCAATTAGGTGGCAAACATGAACGTGTCATTGCCACTCAATTTGACCAAGTTTCTATACCTCATGATCTCATGTTTTCTACATCCGAGGAGCTGTTTGACTTCATTGCTTTGGGGCTAGCAAAATTTGCTTCCAAGGAGGATGATAGATTTCATTTCCCCCAAGGACAAGGAAGAAAGAGAGAGATTGGGTTCACATTTTCATTTCCTGTGAAACAAACTTCTATTGATTCTGGCATACTAATTAAGTGGACCAAGGGTTTTGCTGTCTCTGGAACTGTAGGAAGAGATGTGGTTGCTTGTTTAAATGAGGCTATGGAAAGGCAAGGATTAGATATGCGAGTTTCGGCTCTGGTTAATGATACCGTTGGAACACTAGCTGGAGCGGAATACTGGGACAATGATGTTATGGTTGCTGTTATTTTGGGTACTGGAACCAATGCTTGCTATGTTGAGCAGATAAGTGCAATTCCAAAATTACAAGGCCACGTCTCGTCTTCTGGTAAAATGATCATTAGTACTGAGTGGGGGTCTTTTTCAAATGGTCTCCCTTTAACTGTTTTTGATAGAGAAATGGATGCTGCTAGCATCAATCCTGGTCAACAGATCTTTGAGAAGACAATCTCAGGAATGTATCTAGGTGAAATTGTGAGAAGAGTGCTAGTCAATATGGCTGAAGAGGGTGATTTGTTTGGAAAATCTGTCCCTCAAAAACTGTCTACGCCTTTCATACTCGGGACCCCAGATCTAAGTGCCATGCAGCAGGATAGTTCTGATGATTTACAAGCCGTTGGTACCCTCCTCTATGATAAAGCAGGGGTTGAATCCAATCTATGTGAAAGAAAAACAGTTCTAGAAGTTTGTGACACAATTGTAAAGCGAGGCGGAAGCTTAGCTGGTGCAGGAATTGTTGGGATTCTGCAAAAAATGGAAGAGGATTCAAAAGGTCTTATCTTTGGAAAGAGAACTGTTGTTGCAATTGATGGGGGTTTGTATGAAAATTATCCACAATATAGGACTTACTTGCAAGATTCAGTCAAAGAGATATTAGGAACTGAAAAGTCAAACAATGTGGTAATAGAACATTCAAAAGATGGTTCTGGCATTGGTGGTGCTTTATTGGCAGCTTCAAATTCCATGTACAAGCAAGATTGA 1476 0.4329 MSVSVSVTVPSVVGPFLSQSRRRLRRSTTALRSDTVSVGPARLLRKLKQECGTPLPLLQYVADTMSSEMRAGLASYDGPGLPMIPIMNEKGLFYALDLGGTNFRVLRVQLGGKHERVIATQFDQVSIPHDLMFSTSEELFDFIALGLAKFASKEDDRFHFPQGQGRKREIGFTFSFPVKQTSIDSGILIKWTKGFAVSGTVGRDVVACLNEAMERQGLDMRVSALVNDTVGTLAGAEYWDNDVMVAVILGTGTNACYVEQISAIPKLQGHVSSSGKMIISTEWGSFSNGLPLTVFDREMDAASINPGQQIFEKTISGMYLGEIVRRVLVNMAEEGDLFGKSVPQKLSTPFILGTPDLSAMQQDSSDDLQAVGTLLYDKAGVESNLCERKTVLEVCDTIVKRGGSLAGAGIVGILQKMEEDSKGLIFGKRTVVAIDGGLYENYPQYRTYLQDSVKEILGTEKSNNVVIEHSKDGSGIGGALLAASNSMYKQD 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03586 491 CDD NBD_sugar-kinase_HSP70_actin 95 259 - -
Car04g03586 491 PANTHER HEXOKINASE-LIKE 1 PROTEIN-RELATED 24 488 - -
Car04g03586 491 Pfam Hexokinase 245 483 IPR022673 GO:0005524|GO:0005975|GO:0016773
Car04g03586 491 Pfam Hexokinase 45 238 IPR022672 GO:0005524|GO:0005975|GO:0016773
Car04g03586 491 Gene3D - 86 482 - -
Car04g03586 491 ProSiteProfiles Hexokinase domain profile. 38 483 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Car04g03586 491 PRINTS Hexokinase family signature 245 259 - -
Car04g03586 491 PRINTS Hexokinase family signature 222 238 - -
Car04g03586 491 PRINTS Hexokinase family signature 94 110 - -
Car04g03586 491 PRINTS Hexokinase family signature 309 331 - -
Car04g03586 491 PRINTS Hexokinase family signature 391 413 - -
Car04g03586 491 PRINTS Hexokinase family signature 170 195 - -
Car04g03586 491 PRINTS Hexokinase family signature 468 484 - -
Car04g03586 491 SUPERFAMILY Actin-like ATPase domain 40 240 IPR043129 -
Car04g03586 491 PANTHER HEXOKINASE 24 488 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Car04g03586 491 SUPERFAMILY Actin-like ATPase domain 242 486 IPR043129 -
Car04g03586 491 Gene3D - 64 471 - -
Car04g03586 491 ProSitePatterns Hexokinase domain signature. 170 195 IPR019807 GO:0004396|GO:0005524|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03586 Car-Chr4 65081722 65085452 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03586 04 65081722 65085452 Car04g03586 04 65081722 65085452 ECH