Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03576 ATGGACCGAAGGTGGCCTTGGAAGAAAAAATCATCTGATAAGGCTGTGCTTGATAAAGTAGCTGCTGAATTGGACTCTGCTGGTGCCTCTAATCAGGCCAATCAGGATGTTTATCAGAAGCCGAACTATGTCCAAATCTCTGTAGAGTCGTATTCACATTTGACGGGTTTGGAGGATCAAGTGAAGACATATGAAGAAAAGGTTCAGACACTCGAGGATGAGATCAATGAATTAAATGAAAAACTGTCAGCAGCAAACTCAGAGATAAACACCAAGGAAACTTTGGTAAAACAACACGCTAAAGTAGCTGAAGAGGCTGTCTCAGGATGGGAAAAGGCAGAAGCAGAAGCTTTGGCGTTGAAGAACCATCTAGAATCTGTCACTCTTTCAAAGCTCACTGCTGAGGATCAGGCATCACAGTTAGATGGTGCTCTTAAAGAGTGTATGCGACAGATAAGAAACCTGAAGGAAGAACATGAACTGAAAATACAGGAAGTTGCCCTCGCAAAAACCAAGCTATTGGACAAGATTAAGGGTGAGCTTGAGGCTAAGATACAGAACTTTGAACAGGAACTCCTCAGGTCTGCTGCTGATAATGCGGCTCTGTCAAGGTCCTTGCAGGAGCGCTCCAACATGCTAATCAAACTAAGTGAACAAAAAGCTCATGCTGAGGCTGAAATTGAGCATCATAAGAGTAACGTAGAATCATGTGAAAGAGAAATCAATTCACTTAAATATGAGCTTCATGTTATGTCCAAAGAGCTTGAAATTCGCAATGAAGAAAAGAACATGAGTATGAGGTCTGCAGAAGCTGTTAACAAGCAGCATATGGAGGGTGTTAAAAAGATTGCCAAATTAGAGGCAGAGTGCCAAAGGTTACGTGGTCTAGTACGGAAAAAGTTACCTGGTCCTGCTGCGCTCGCACAAATGAAGCTGGAAGTTGAAAATCTTGGCTATGGAGAAACTCGATTAAGGAAGTCTCCTGTCAAACCTGCTAGTTCTTATTTGTCTCCATTGCCTGATTTATCCTTGGAGAATATACAGAAATTCCAGAAAGATAATGAATTTCTTACAGAGCGCTTATTGACAATGGAAGAAGAAACAAAGATGCTGAAAGAAGCTTTGGCAAAACGTAACAGTGAATTGCAGGCTTCAAGGAGTATGTGTGCTAAAACACTTAGCAAACTTCAAATTTTGGAAGCACAAAGTCAGACTTGTAATCAGCAGAAGGGATCTCCGAAATCTACCATCCATATGAACCATGAAAGCATTTACAGTCAAAATTCAGGCTATGCACCTAGCATGCTCTCCATATCTGAAGATGGTAACGATGATACAGGAAGTTGTGCCGATTCTTGGTCTACAGCAATAATATCTGAGCTATCCCAACTCCCAAAAGAAAAGAGTGCTGATGAATTGAGCAAATCTGAAGCCACTAAGAAGTTGGAACTGATGGATGACTTTCTGGAAGTGGAGAAGTTTGCTGGATTATCAAATGATTCTAATGATGACGCCTCAGTGTCATGTACTTCGAACAATAAAACAGAAGAAATTGTGAATGATGTATCAGAAGTCAGTACCAGCAAAGATGATCCCTCAGAGTCTGAAAATAAGGGTGATTTGAATCCATTGCCAAGTCAAGTGTCTCCTGGTGCAGAATCATCAGCACCCACTCCGAGTGGGGTTGATGGCTTATCACCAGCAGAGCTTCAATCAAGAATACTATCAGTTTTTGAGTCCATGGCAAAGGATGCTGATATAGGTAAAATCCTGAAGGATATTAAACATGTTCTTGAAGAAGCACACGAGACTTCCATCCAAGACTCTGTAGCTGTCATTTCTTTTGACGTCACACCTGCTGACATTCCATGTGATAAAAAGGATAGTCCTGAAGATGCTGGTTCAGTCGCAGAAAAAGAACTCATTTCTTCTGAAGATCCTACTAAATATATGCAGATAACTTCAGATATAGAAGCTGCAATTTCTCAAATTCATGACTTTGTATTGTTCCTAGGCAGAGAAGCAATGACAATTCATGATATATCTTCTGACGGGGATGGAATAAGCCAAAAGATGGAGGAGTTCTCTGTTACTTATAATAAAGTTAAATGCCATGATGCTAATTTGCTACAGTTTGTTCTTGATCTGTCTCATGTCTTGGCTAAAACAAGCGAATTCAGATTTAATATATTTGGTTATAAGGGTATGGAAGCTGAAACTAACAGTCCTGATTGCATAGATAAGATTGCTCTGCCTGAAAATAAGTTAGTTCAAGACAATTCGTCAGGAGAGAGATATCAAAATGGCCATTCTCATATTCTTAATACCTGTTCTAATCCTGAGGTTCCCGATGATGGAAATTTGACCTCAAGCTATGAATCAAATTCCACATCACAAAAGTTCTCCGTCGAGGACTTTGAGGAATTGAAATTAGAGAAAGAGAAGGCAATAGGGGATCTGTCAAAATGTTCCGAAAATCTTGAAATGACTAAGTGTCAGCTACAAGAGACTGAACAACTTCTAGCTGAAGTTAAATCACAATTGGCTTCTGCTCATAGGTCAAACAGCTTGGCTGAGACTCAACTAAAATGCATGGCAGAGTCGTACAGATCACTTGAAACACGTGCACAGGAGTTTGAAACTGAGCTCAACCATCTGCGAATGAAGACAGAAACTCTTGAGAATGAACTCAAAGATGAAAAGAGATCTCATGAAGCAGATTTGGCGAAGTACAAGGAGCTAGAAGAACAATTACAAAGGAATGAGAGCTCTGCTGCTGATACTGACCTTAAGACTAAAAAGGAGAGAGACTTGGCTTCTGCTGCCGAAAAGCTAGCTGAGTGTCAGGAAACCATATATCTTCTTGGCAAGCAGCTAAAATCTCTGCATCCTCATACAGAACCAATGGGATCTCGGTACGGTGAGAGGCCTACGGAGAATGAAGGTTTCGCAGAGCATGAACCTCAGAGCCCAAATTTGCAGGATCTGGATCAGGTGGAGTTGGACGGTGCTAGTTTTGCTTTTATGCAAAGACAGGATGCAGGGTCCCCTTTGCATTTCTCCAACAACTTATATAGTCCATCAGATAATGACTCAAACTTTCAAGCCATATCTCCTGTACAGCATCCAAATCACAAGCCTACAAAGTCAACCTCTTCTTCAGCTTCTTCCACTCCTACACCAGAGAAACATGGCCGAGGTTTTAGTAGATTCTTTTCATCAAAAGGAAAAACCGGTCATTGA 3243 0.4095 MDRRWPWKKKSSDKAVLDKVAAELDSAGASNQANQDVYQKPNYVQISVESYSHLTGLEDQVKTYEEKVQTLEDEINELNEKLSAANSEINTKETLVKQHAKVAEEAVSGWEKAEAEALALKNHLESVTLSKLTAEDQASQLDGALKECMRQIRNLKEEHELKIQEVALAKTKLLDKIKGELEAKIQNFEQELLRSAADNAALSRSLQERSNMLIKLSEQKAHAEAEIEHHKSNVESCEREINSLKYELHVMSKELEIRNEEKNMSMRSAEAVNKQHMEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKLEVENLGYGETRLRKSPVKPASSYLSPLPDLSLENIQKFQKDNEFLTERLLTMEEETKMLKEALAKRNSELQASRSMCAKTLSKLQILEAQSQTCNQQKGSPKSTIHMNHESIYSQNSGYAPSMLSISEDGNDDTGSCADSWSTAIISELSQLPKEKSADELSKSEATKKLELMDDFLEVEKFAGLSNDSNDDASVSCTSNNKTEEIVNDVSEVSTSKDDPSESENKGDLNPLPSQVSPGAESSAPTPSGVDGLSPAELQSRILSVFESMAKDADIGKILKDIKHVLEEAHETSIQDSVAVISFDVTPADIPCDKKDSPEDAGSVAEKELISSEDPTKYMQITSDIEAAISQIHDFVLFLGREAMTIHDISSDGDGISQKMEEFSVTYNKVKCHDANLLQFVLDLSHVLAKTSEFRFNIFGYKGMEAETNSPDCIDKIALPENKLVQDNSSGERYQNGHSHILNTCSNPEVPDDGNLTSSYESNSTSQKFSVEDFEELKLEKEKAIGDLSKCSENLEMTKCQLQETEQLLAEVKSQLASAHRSNSLAETQLKCMAESYRSLETRAQEFETELNHLRMKTETLENELKDEKRSHEADLAKYKELEEQLQRNESSAADTDLKTKKERDLASAAEKLAECQETIYLLGKQLKSLHPHTEPMGSRYGERPTENEGFAEHEPQSPNLQDLDQVELDGASFAFMQRQDAGSPLHFSNNLYSPSDNDSNFQAISPVQHPNHKPTKSTSSSASSTPTPEKHGRGFSRFFSSKGKTGH 1080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03576 1080 MobiDBLite consensus disorder prediction 523 537 - -
Car04g03576 1080 MobiDBLite consensus disorder prediction 1019 1063 - -
Car04g03576 1080 Coils Coil 862 951 - -
Car04g03576 1080 Coils Coil 178 198 - -
Car04g03576 1080 MobiDBLite consensus disorder prediction 539 561 - -
Car04g03576 1080 Coils Coil 54 95 - -
Car04g03576 1080 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 1080 - -
Car04g03576 1080 MobiDBLite consensus disorder prediction 1019 1080 - -
Car04g03576 1080 Coils Coil 138 172 - -
Car04g03576 1080 MobiDBLite consensus disorder prediction 522 566 - -
Car04g03576 1080 SUPERFAMILY Tropomyosin 808 964 - -
Car04g03576 1080 MobiDBLite consensus disorder prediction 962 992 - -
Car04g03576 1080 PANTHER FILAMENT-PLANT-LIKE PROTEIN 1 1080 - -
Car04g03576 1080 Coils Coil 347 374 - -
Car04g03576 1080 Pfam Filament-like plant protein, long coiled-coil 92 968 IPR008587 -
Car04g03576 1080 Coils Coil 206 254 - -
Car04g03576 1080 Coils Coil 820 854 - -
Car04g03576 1080 MobiDBLite consensus disorder prediction 969 983 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03576 Car-Chr4 64950051 64955796 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03576 04 64950051 64955796 Car04g03576 04 64950051 64955796 ECH
Car04g03576 04 64950051 64955796 Car05g03258 05 77331218 77337070 PCT