Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03574 ATGGTTTCCTTAGAAGAAAAGGTTAAAAGTgttggtgttggagttggagttggaggaggagGACTTGTTGCTGAAATGAAATTGCTTAAAGAAATGCAGGAACATTGTGGGGTTAGAAAGACTTTAAATTCAGAATTATGGCATGCTTGTGCAGGACCTCTTGTGTCTTTGCCTCAAGTGGGGGGTCTTGTGTATTACTTCCCTCAAGGACATAGTGAACAGGTGGCAGCTTCTACTAGAAGAACAGCAACCTCACAGATTCCAAACTACCCAAATCTTCCATCTCAGTTGTTGTGTCAAGTTCAAAATGTTACACTGCATGCTGACAAGGAGACAGATGAAATCTATGCACAAATGACTCTCCAACCATTGAATTCGGAAAAAGAAGTGTTTCCTATATCTGAGTTTGGACTAAAGCAAAGTAAGCATCCCACTGAGTTTTTCTGCAAAACGTTGACTGCAAGTGACACAAGCACACACGGCGGCTTTTCTGTTCCACGAAGGGCGGCAGAAAAGCTATTTCCTCCGTTGGATTACACAATTCAACCTCCAACTCAAGAACTTGTTGTTCGAGATTTGCATGATAACACCTGGACATTTCGACATATATACCGAGGTCAGCCAAAGAGACACCTTCTCACAACAGGATGGAGTTTGTTTGTGGGATCGAAAAGGCTTAAAGCAGGCGATTCTGTTCTTTTTATCAGGGATGAGAAATCGCAATTGCGAGTTGGTGTAAGGCGTGCTAACCGTCAACAGACAACGCTGCCTTCGTCGGTACTTTCAGCTGACAGTATGCACATTGGTGTGCTAGCCGCTGCAGCTCATGCTGCTGCTAATCGAAGTCCATTCACGATTTTCTACAATCCAAGGGCATGTCCTTCAGATTTTGTTATTCCACTAGCCAAGTATAGAAAATCTGTTTATGGGACTCAACTCTCAGTTGGCATGAGATTTGGTATGATGTTTGAGACCGAGGAATCGGGTAAGCGCAGATTCATGGGTACAATTGTCGGTATCAGTGATGTGGATCCTTTGAGGTGGCCGGGTTCTAAGTGGCGAAATATTCAGGTGGAGTGGGATGAGCCAGGATGTGGCGACAAGCAAAATAGAGTTAGCGTATGGGAGATCGAGACTCCAGAAAGCCTTTTTATCTTTCCTTCTTTGACTTCGAGCCTAAAAAGGCCATTACAAACCGGATTTTTGGAAAATGAGTGGGGAAATTTGTTGAGGAGACCTTTTATTAAAGTACCTGAAAGTCAAACAATGGATCTTTCAAACTCGATGCCGAATCTCTACCAAGAACAAATGATGAAGATGCTTTATAAACCTCAAGTTATCAACAACAATGGAGCCTTTTTACCTACCATGCAACAAGAATATGCTCCTATAAGACTTCCCTTGCAAGAAATGAAGTCCACACAGCTAATAGAGAATCCGAAATTTCATCTCGCGAATACAGAGAGCATACCGATAAAAAGTCAACATTCTCAATCTATCCCTGACCAAACTAATACCTTTAACATGCATTCATTGTTGAAAAGTGATCAACCTGAAAAATTGCATCATCCGGCCAAAATGGATAATCATTTGCCTTCTGGAACCGTTACTGATAAGCCTAAATTAGAATCTGAGGTCTTACCTGATAATATGTTTGACCTACCTTCTTTGGAAGGCTGCAACGTTGATAAAGTGGCTGCACCGAATCTTGTTAACTCTCAAAGCCTAACAAACCAATTTCCATATCATAATCAAAACCAAAATCCACTACTCAATCAATCTAGTAGTGCATGGCCTATGCAGCAACCTCAGTTAGAATCATCAATATCACATCCTCAAATGGTCGACATGGTCCAACCCGATTCTTCTATTGTAAACAGCATGCTCCCTCAGCTAGACATCGATGAATGGATGATGTATCCTCAAGTAGCGAATCCCTCTATGCCTTCAATGAACCAAGATGTGTGGGATCATTATGTCAAGAATTTCAAGTATTTATCTCAGCCAGATCAGTTAACAACATCTAGCATCATTCAGCAAGAAGTGTATGGATTCAATGATATATCTAGTTCAAACAACTTGAGGGATCTTTCATCCGAAAGCAATAACCAAAGTGAAATATGTGTCAATGTGGATGGGAGTAATAGTGTGAGTACCGCCATAGTTGATCCTTCTACTTCAAGCACTATTTTCGACGACTTTTGCACAATGAAGAATAAAGAGTTTCAACATCCTCAAGATTGCATGGTTGGCAACTTAAGTTCTAGTCAGGACGGTCAGTCTCAGATAACCTCCGCGAGTCTAGCTGAGTCGCACGCCTTTTCGCTCCGAGACAACTCGGGTGGTACATCTTCAAGTCATATTGATTTTGATGAAAGTAGCTTTCTTCAGAATAATAATAACTCATGGAAGCAAGTAGCTGCACCGATCCGAACCTACACAAAAGTGCAAAAAGCAGGTTCTGTTGGAAGATCAATTGATGTAACTACTTTCAAGAACTATGAAGAGTTGATCTGCGCAATCGAATGCATGTTTGGATTGGACGGTCTGCTGAATGATACGAAAGGTTCAGGATGGAAATTAGTATATGTAGATTATGAGAGTGATGTTCTACTTGTTGGTGATGATCCTTGGGAGGAATTTGTAGGGTGTGTGAGGTGTATCAGAATATTATCACCTTCAGAAGTTCAACAGATGAGTGAAGAAGGAATGAAGCTTCTAAACAGTGGAGCATTGCAAGGAATCAATGTTTGA 2754 0.4074 MVSLEEKVKSVGVGVGVGGGGLVAEMKLLKEMQEHCGVRKTLNSELWHACAGPLVSLPQVGGLVYYFPQGHSEQVAASTRRTATSQIPNYPNLPSQLLCQVQNVTLHADKETDEIYAQMTLQPLNSEKEVFPISEFGLKQSKHPTEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLKAGDSVLFIRDEKSQLRVGVRRANRQQTTLPSSVLSADSMHIGVLAAAAHAAANRSPFTIFYNPRACPSDFVIPLAKYRKSVYGTQLSVGMRFGMMFETEESGKRRFMGTIVGISDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWEIETPESLFIFPSLTSSLKRPLQTGFLENEWGNLLRRPFIKVPESQTMDLSNSMPNLYQEQMMKMLYKPQVINNNGAFLPTMQQEYAPIRLPLQEMKSTQLIENPKFHLANTESIPIKSQHSQSIPDQTNTFNMHSLLKSDQPEKLHHPAKMDNHLPSGTVTDKPKLESEVLPDNMFDLPSLEGCNVDKVAAPNLVNSQSLTNQFPYHNQNQNPLLNQSSSAWPMQQPQLESSISHPQMVDMVQPDSSIVNSMLPQLDIDEWMMYPQVANPSMPSMNQDVWDHYVKNFKYLSQPDQLTTSSIIQQEVYGFNDISSSNNLRDLSSESNNQSEICVNVDGSNSVSTAIVDPSTSSTIFDDFCTMKNKEFQHPQDCMVGNLSSSQDGQSQITSASLAESHAFSLRDNSGGTSSSHIDFDESSFLQNNNNSWKQVAAPIRTYTKVQKAGSVGRSIDVTTFKNYEELICAIECMFGLDGLLNDTKGSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMSEEGMKLLNSGALQGINV 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03574 917 Pfam Auxin response factor 274 357 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Car04g03574 917 Gene3D - 312 384 - -
Car04g03574 917 ProSiteProfiles PB1 domain profile. 811 895 IPR000270 GO:0005515
Car04g03574 917 MobiDBLite consensus disorder prediction 579 607 - -
Car04g03574 917 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 29 915 IPR044835 GO:0003677|GO:0006355|GO:0009725
Car04g03574 917 PANTHER AUXIN RESPONSE FACTOR 5 29 915 - -
Car04g03574 917 MobiDBLite consensus disorder prediction 519 539 - -
Car04g03574 917 CDD B3_DNA 147 248 IPR003340 GO:0003677
Car04g03574 917 Gene3D - 807 900 - -
Car04g03574 917 SMART B3_2 148 250 IPR003340 GO:0003677
Car04g03574 917 SUPERFAMILY CAD & PB1 domains 812 890 - -
Car04g03574 917 SUPERFAMILY DNA-binding pseudobarrel domain 138 277 IPR015300 -
Car04g03574 917 ProSiteProfiles B3 DNA-binding domain profile. 148 250 IPR003340 GO:0003677
Car04g03574 917 Pfam AUX/IAA family 802 898 IPR033389 -
Car04g03574 917 Pfam B3 DNA binding domain 148 249 IPR003340 GO:0003677
Car04g03574 917 Gene3D - 145 249 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03574 Car-Chr4 64877885 64883515 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Car04g03574 AUX_IAA 3.2e-11 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03574 04 64877885 64883515 Car04g03574 04 64877885 64883515 ECH