Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03568 ATGACTGAATGGGAAGGTTTTGATCAAAGTGGTAGTAGTAAGCAAAAAAATAGACCCCCAATTCCATTGAATGCTATGTCTTTGCCTATTAATCAAATGGGTTTTCCTGAGAATCACAAAAATTCTTCAATTGGTGGTATACCACCTTCTTACCCTAATACCAATTCATCACCTAAACCCTTATCGTCTCCTTATCCCCAATTTATGGCTTCTTCTCAATCCCATCATCATTCTAGGTCTTTGTCTCAGCCCACTTTTTTCTCTTTAGATTCATTTTCATTGCCTCCATTGAGTCCTTCCCCTTATCCTGCAAATTCTTCATCGTTTTCCGACTTGGTTTCGAAAGATGTTTCTATGGAGGAAAACTTGGTTAACTCTCATGCCCCTTCGCCTAACCGTGGTCACGCTATTCAGCATGGCCATTGTCTTCCCCCTCGGAAAGGACACAGGCGTTCTAGCAGCGATTCTCCCTTGGGGATATCGGAATTTGTTAACTCTGTTCCTCAGTTGATGAGTGATCCTCGAAATTTGGTTAACGGAGGAGAAAAACCTGGTTATCAGAAGCCGATTCAGTTGGTGTTGAAGGATAATAGGGAATGTATTGATGGTTTTCGAGGAGAGAATTTGGATCGTAGGAGGAAAGAGGATGATGCGAATGCGATTGAAATGGATGATTTGTTTAATGCATACATGAATTTGGAGAACATGAATAATATGAGTTTTTCCGGTTTGGAAGATAAGGATATGGACAGCAGAACTAGTGGTTCAAAGACAGTTGAAAGCAGTGATAATGAAGTTGAGAGTATTGTAAATGTAAAAGGAACCGGTGCTAAGGGTGCGAGTTCGAGCTGTTCAGAAGAGAGGAGGGAAGGACTCAAGAGGAGTTCTAATGGAGATATTGCACCTGTTGGTCGACATAGGAGAAGTTATTCTTTGGATAGTTCTATTGGAAATTTTCATATTGAAGATGTATCGCCTAAGCTTCCTCCTTTACAAAGTCGAGTTGGTCAACTCTCGCCTAGCAATTCAATGGATGGTGTTAAAACACCAGAAACTAGCTTGGAGTTTGGAAATGGCGAATTCAGCTCGGAGGAGATGAAGAAAATAATGGAAAATGATAAACTTACTGAAATTGCCATGTCAGACCCCAAGCGCGCAAAGAGGATTTTGGCCAATCGTCTATCAGCTGCTCGCTCAAAGGAGCGTAAGATGCGATATATTTCTGAATTGGAGCACAAGGTACAAACTCTTCAGACAGAGACTACTACATTGTCTACTCAGTTTACCAAATTACAGATGGATAATACAGAGCTTAAAAGTGAGAATAACGAGTACAAATTGAGGCTTCAATCCTTGGAACAACAGTCCCAACTGAAAGATGCTTTGAACGAGACTTTGGATGCTGAAGTCCGGCGCTTAAGACGCACCGTTGCAGACCTTGGCGGAGAGTCCCTCCTATCGAATCTCATGGCTCGACAGCTTGCTATTAACCAACAAATGTTCCAGTCACAGCATGAGCAGCCAAACCAGCTTAGACATTTTCAAATGCAAAACAGCCAATCTCAGGAAGAAACACAGACTCAGTCACAACAGCATATTCAACGCACTAATGAATTCCAATCCCAGCATCAGAATGGCAAAACTACTGCATAA 1653 0.4174 MTEWEGFDQSGSSKQKNRPPIPLNAMSLPINQMGFPENHKNSSIGGIPPSYPNTNSSPKPLSSPYPQFMASSQSHHHSRSLSQPTFFSLDSFSLPPLSPSPYPANSSSFSDLVSKDVSMEENLVNSHAPSPNRGHAIQHGHCLPPRKGHRRSSSDSPLGISEFVNSVPQLMSDPRNLVNGGEKPGYQKPIQLVLKDNRECIDGFRGENLDRRRKEDDANAIEMDDLFNAYMNLENMNNMSFSGLEDKDMDSRTSGSKTVESSDNEVESIVNVKGTGAKGASSSCSEERREGLKRSSNGDIAPVGRHRRSYSLDSSIGNFHIEDVSPKLPPLQSRVGQLSPSNSMDGVKTPETSLEFGNGEFSSEEMKKIMENDKLTEIAMSDPKRAKRILANRLSAARSKERKMRYISELEHKVQTLQTETTTLSTQFTKLQMDNTELKSENNEYKLRLQSLEQQSQLKDALNETLDAEVRRLRRTVADLGGESLLSNLMARQLAINQQMFQSQHEQPNQLRHFQMQNSQSQEETQTQSQQHIQRTNEFQSQHQNGKTTA 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03568 550 Coils Coil 428 483 - -
Car04g03568 550 MobiDBLite consensus disorder prediction 1 20 - -
Car04g03568 550 MobiDBLite consensus disorder prediction 255 282 - -
Car04g03568 550 CDD bZIP_plant_RF2 385 457 IPR044759 GO:0003700|GO:0006355
Car04g03568 550 MobiDBLite consensus disorder prediction 1 82 - -
Car04g03568 550 SUPERFAMILY Leucine zipper domain 384 440 IPR046347 GO:0003700|GO:0006355
Car04g03568 550 MobiDBLite consensus disorder prediction 515 550 - -
Car04g03568 550 MobiDBLite consensus disorder prediction 34 82 - -
Car04g03568 550 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 57 550 - -
Car04g03568 550 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 382 445 IPR004827 GO:0003700|GO:0006355
Car04g03568 550 SMART brlzneu 380 444 IPR004827 GO:0003700|GO:0006355
Car04g03568 550 MobiDBLite consensus disorder prediction 323 358 - -
Car04g03568 550 Coils Coil 400 420 - -
Car04g03568 550 Pfam bZIP transcription factor 384 442 IPR004827 GO:0003700|GO:0006355
Car04g03568 550 Gene3D - 381 444 - -
Car04g03568 550 PANTHER BZIP TRANSCRIPTION FACTOR 57 550 - -
Car04g03568 550 MobiDBLite consensus disorder prediction 332 358 - -
Car04g03568 550 MobiDBLite consensus disorder prediction 243 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03568 Car-Chr4 64816186 64820051 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Car04g03568 bZIP_1 2.6e-10 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03568 04 64816186 64820051 Car04g03568 04 64816186 64820051 ECH