Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03564 ATGACCACCGCCACCACATGGCTCCTCTTCCTTCTTCCAATTCTAATAACCACCGCCATGACATGGCGAGTAACTGCCGCCGGTAACGGACAATGGCAACAACTACAAAAAAACATAGGTATTGTAGCCATGCACATGCAACTTCTTCACAACGACCGCATCGTCATTTTCGACCGAACTGATTTTGGCTTATCCAATCTCTCTTTACCTAATGGAAAGTGTCGTCATGATCCCAAAGAAACAACCGTTAAAACTGATTGCACCGCTCATTCCGTTGAATATGACGTTAAATCCAACACTTTTCGTGCATTGTTTGTTCAAACTGATGTTTGGTGTTCCTCCGGCACGGTGAATCCAAACGGAATACTTATCCAAACCGGTGGCTTCAACGACGGAGACCGTGCCGTCCGAATCTATAATCCTTGTGACGACTGTGATTGGCAAGAATTTGACGGTGGACTTACCGCTCGGAGATGGTATGCCACCGATCATATTTTGCCAGACGGTCGTCAAATTATAATCGGAGGTAGAAAACAATTTAACTATGAGTTTTATCCTAAGAATCACGAGGTTGACAAAAAAGTGTATAATTTACCATTTTTGGATGAGACTAATGACCGTGGTGAAGAGAATAATTTGTATCCTTTTGTTTTTCTTAATGTTGATGGCAACCTCTTCGTCTTCGCCAACAATAGAGCTATCCTCTTGGATTATACTAAGAATGCTGTGGTGAGAACATTTCCACAAGTGCCAGGTGGGGAACCTAGGAGTTATCCAAGCACAGGTTCTGGGGTATTGTTACCCTTAAAAAATTTACAATCCAAAGCTGTAGAAGCTGAAGTTTTAATTTGTGGAGGAGCCCCAAAAGGGTCATTTCAGCTAGCAACAAAGAACAAATTTCTTAAAGCTTTAAATACTTGTGTCCGAATCAAAATAACCGACCCGAACCCAAAATGGGTTATGGAGACCATGCCCGGGTCAAGAGTAATGAGTGACATGGTAATGCTTCCAAACGGCAACGTTTTGATAATTAATGGAGCAGGGTCAGGAACCGCCGGGTGGGAATTCGGACGAGACCCGGTTTTGAACCCGGTTCTTTACAAAACGGATAACCCAATTGGATCCCGGTTCGAATTACAAAATCCATCTGAAACGCCAAGAATGTATCATTCCTCAGCGGTTTTGGTTCGTGATGGAAGGGTTCTTGTTGGTGGTAGTAACCCTTACATTGGTTACAATTTTATTAATGTGTTGTTTCCAACTGAACTTAGTATTGAAGCTTTTTCTCCTTCTTATCTAGAACCTAGATTCGCGAATGTTCGTCCCAAGATTATGTCTCATATTTCTGAGTCTCAAACAAAACTTAGGTACGGTCAGAAATTGGTATTACGATTTCAAGTGAAAACAACATTGGATCGTAATTTATTATATGTTACATTGTTGGCGCCTCCTTTTAATACACACTCATTCTCCATGAATCAGAGGTTGTTGGTGTTGGAGCCAAATAAAGTAAATAATGTAGCGGGAACAACATATGAAATTGTGGTTACTATACCTGGTTCAACAATTCTAGCACCTCCCGGTTTTTATATGTTATTTGTGGTCCATAAAGAAATTCCTAGTGAAGGTATTTGGATACAAATGCTTTGA 1650 0.4109 MTTATTWLLFLLPILITTAMTWRVTAAGNGQWQQLQKNIGIVAMHMQLLHNDRIVIFDRTDFGLSNLSLPNGKCRHDPKETTVKTDCTAHSVEYDVKSNTFRALFVQTDVWCSSGTVNPNGILIQTGGFNDGDRAVRIYNPCDDCDWQEFDGGLTARRWYATDHILPDGRQIIIGGRKQFNYEFYPKNHEVDKKVYNLPFLDETNDRGEENNLYPFVFLNVDGNLFVFANNRAILLDYTKNAVVRTFPQVPGGEPRSYPSTGSGVLLPLKNLQSKAVEAEVLICGGAPKGSFQLATKNKFLKALNTCVRIKITDPNPKWVMETMPGSRVMSDMVMLPNGNVLIINGAGSGTAGWEFGRDPVLNPVLYKTDNPIGSRFELQNPSETPRMYHSSAVLVRDGRVLVGGSNPYIGYNFINVLFPTELSIEAFSPSYLEPRFANVRPKIMSHISESQTKLRYGQKLVLRFQVKTTLDRNLLYVTLLAPPFNTHSFSMNQRLLVLEPNKVNNVAGTTYEIVVTIPGSTILAPPGFYMLFVVHKEIPSEGIWIQML 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03564 549 Pfam Galactose oxidase-like, Early set domain 448 547 IPR015202 -
Car04g03564 549 CDD E_set_GO_C 437 548 IPR015202 -
Car04g03564 549 SUPERFAMILY E set domains 438 547 IPR014756 -
Car04g03564 549 PANTHER SECRETED PROTEIN-RELATED 21 548 - -
Car04g03564 549 SUPERFAMILY Galactose oxidase, central domain 92 434 IPR011043 -
Car04g03564 549 Pfam Glyoxal oxidase N-terminus 44 286 IPR009880 -
Car04g03564 549 Gene3D - 26 436 IPR037293 -
Car04g03564 549 PANTHER OXIDASE, PUTATIVE, EXPRESSED-RELATED 21 548 - -
Car04g03564 549 Gene3D Immunoglobulins 440 549 IPR013783 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03564 Car-Chr4 64790477 64793580 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03564 04 64790477 64793580 Car04g03564 04 64790477 64793580 ECH
Car05g03256 05 77300086 77302220 Car04g03564 04 64790477 64793580 PCT