Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03563 ATGGAAGGAGAAGATTTGAGGTCAGGGACCAAGAAGCATAGGAAGAGATCTAAACCTATTGAAATTGGTTTTGATTCGGATAATGATGAACCGATTGGTTCTTTGTTTAAGTTTAAGAGGAATAAGAAGAAGGTTAGTTTTGCATCAGAGGAAGATTCTGTTAGGGAAAAGGGGGATTTTAGGGGTATGGATGATAATGATACATTGGCTAGCTTTAGGAAGAGATTGAAGGGTCCAAAGAGAGATCAGGGATCTGAAAATGTTTCCGTTGAGGGTCATGGTGATGGTTTGGTTGTTGGGGGATCTGGGAGCAGAACTAAGGGTGAGAAAGGGGTGGATTTGTTGCTTGGTGACGATGACATGCAGTTGCATCAATCTTCTGATCAGCATATGGAAGAAGATTCCTTGTCTGCAATTTTCCATAAGGCACAATCTAATTCTGTGAGGAAATCCCGTGGTGCGTTAAGTTCGAAGCAGAAAAAAGGGAATCGGAATGTGGATAGTGGGTTGAACTGTGGCTCCAAAAGTTTCACAGAAAACGTAGATTCTGTGGTTGAAAGTAGATCTGGATCTGTTTCTGTATTGAAATTGGTTGAGAGGAATTTGGTGTCTGATATGATTTGTTCAGTATCTGCTATGGATAATCAAAAGGGTGGCGATGACTGTTTTCAAGAGGAAAAGTCCAAGGACATTTGTGATTCGAACATTCTAGATGGACCGTTGGTTGATCACTCTAACTCAATCATAGCTTGTGTTGAAGATAGGCAGCAATTGTCAAGTGTAAAAGTTGAAATGGTTTGTGGTGCTTCTGACGAAAAGGTGGCGTTGCAAGAAAGAATGCCTGATAATGGTTTGAATCAGTGTTCAGCCATGTTACGGGATATAGAAATAAGTGATACTGCCTCTCCCTCTAAAGTGGGGGAAGGGGTATGTGGGTTTTCTGAGGCTGGAAGGTTGGAGAATAGATTGACTAATGAAATAGCGGAAGAACAAGTGTGTAATGGTGTTTCTACTTCTGCAGGGAAAGAAATTTCATTAACTTGTAACACTGAGCCCTTGATCAAATCAAATGAAAATATATTGAATGAGAATAATGCCATGGATTCTGGAAAAACTTTCCAGGAATCCTCAATCAATGAAGGTATGAAATTGGAAATTGGGTTTGTTTCTGGTAGAAATTGCTATGATTATAGTAGTGTAGATATAAATGCTGAAGTGCAAGATGTTGTTGTAGGCTGTTCTTCTGAAAAACATGATGGGATTGACATCGGTAGTTTATCATCTATAGTGCCTAATGATGCCATTAAATCTGAATTGGTTGTCCAGTCAAATCACCCAGACAAACTTTTGGAAGTGTGTAATATTCCAAAAAACTCTACTGCTTCAATTCTTAAATGCAGCTCTGTGTTAGATCCAATTCAATCTGATGGATCCTCTATACAATCTTCAATCCCAGATGAAAATGGAAACACTGCAGAATATCATGCCTCCATGTCTGATTTTGCCGACATTGGTGGTAAGATATCAGGCATTCCTCGTGCAACACGAAAGACCAAAATGCATAAACATGGTGACATGACTTATGAGGGGGATGCTGATTGGGAGATTTTAATAAATGATAAAGCTCTAAATGAAAGCCAAGGTGCTGCAGATGGTGAACGTACTCATAGAACAAGAGCGAAGCAGGATTCCTCTTTGAATCCTGTTGAGGACTCTGAAAATGTTGCAGTAGCGGCAGTATCTGCTGGGCTGAAAGCTTGTGCAGCTGGTCCAATTGAGAAACTAAAATTTAAGGAGATCTTGAAGCGTAAAGGTGGTCTCAAGGAATATTTAGATTGCAGGAATAAGATCTTAAGCCTATGGAGCAGTGATGTCACACGTATTTTACCTCTTGCTGAGTGTGGAGTTAGTGATATCCGTTCTGAGGATGAAAATCCTCGTTCTTCTCTTATTAGGGAGGTCTATGCATTTCTTGATCAATATGGTTATATAAACATTGGAGTTGCCTCTCAAAAGGAAAATGTTGAGAGCAGTGCAAGACATTGTTATAAACTTGTAAAAGAAAAGGGATTTGAGGAAAGTTCTGCAGCTTCATTGGTCGATTCTGAAGATGGAGTTTCTTTTATTGTTGGTCAGACTAAAATGTCATATGATTCTATGGAGATTAACAATGGTCTATTAAAGGATTTTGAAGACCTGACAACTGAAGCTCCAGAAGGCATGATGCATGTCAATGAAGCGATGACTGATCCATCAAACTTGACACAACTTGATAGAAAAAATTTTGATTACCAGGATAATAATGTTGGGATTCAGGATGGAGTCAGTGGAATTATACATTTCAATGCTAACAGTTCCGTTCCTTCTTTTAAGTTTTCCGATTGCAGATTGTCTTCTCTTGTGGCTACAAAGCAAAGCAACGAATCTAAATGTGTTAAACAACATGCCTTAGGTGATACTCTGCAGTCTGATTCAGATGCTAGAAAGAGAGTGATTATCATTGGAGCTGGTCCTGCTGGGCTAACTGCTGCTCGTCATTTGAAACGTCAGGGGTTTACTGTTACTGTGCTTGAGGCTAGGAATAGGATAGGAGGTCGGGTATTTACAGATCGCTCATCTCTTTCTGTCCCTGTGGATCTTGGTGCTAGCATTATCACGGGTGTTGAGGCTGATGTAGCCACTGAGAGAAGACCAGATCCTTCCTCGTTGGTTTGTGCTCAGCTGGGCCTTGAATTGACAGTGTTAAACAGTGACTGCCCTCTTTATGACATAGTGACTGGACAAAAAGTTCCTGCAGATATGGATGAAGCATTGGAAGCTGAATACAACAGTCTTCTTGATGACATGGTACTGGTAGTTGCTCGGAAAGGTGAACATGCAATGAAAATGTCTCTTGAAGATGGTTTAGAATATGCCCTTAAGATTCGGCGCATGGGACACTCTGAAGGTAGTGAAGAAACTAAGCAAAGTAATTCTGAGGACCGTCCATTTGATTCCAAAAGAGAGGGTGCTATGGAACAAAATTTTGATGAGGAGATTTTGGATCCTCAAGAGAGGAGGGTTATGGATTGGCACTTTGCTCATTTGGAGTATGGCTGTGCTGCTTTGCTTAAAGAAGTTTCTCTTCCCTATTGGAATCAAGACGATGTGTATGGAGGATTTGGGGGAGCACATTGTATGATCAAAGGAGGTTATAGCAATGTTGTTGAGTCTCTAGGAGAAGGGCTTGCTGTTCACTTGAACCATGTCGTAACAAATGTGTCGTATGGTATCAAGGAACCTGGCCAAAATTATAAAGTTAAAGTTTCTACATTGAATGGCAATGAGTTTTTTGGAGATGCTGTCCTCACTACTGTCCCACTTGGCTGTTTGAAGGCTGAAACTATACAGTTCTCCCCCTCTTTGCCGGAGTGGAAATATTCTTCCATTCAGCGTCTTGGCTTTGGAGTTCTCAATAAAGTGGTTTTGGAATTTCCTACGGTGTTTTGGGATGATTCGGTGGATTACTTTGGAGCAACAGCTGAGGAGAGAAGCAAAAGAGGTCACTGCTTTATGTTCTGGAATGTCAAGAAAACGGTTGGGGCCCCCGTCCTTATAGCGTTAGTGGTTGGTAAGTCAGCCATCGATGGTCAAAGTTTAAGCTCTTCTGATCATGTCAACCATGCATTGAAGGTTCTTCGAAAACTTTTTGGGGAGGCTTCAGTTCCTGATCCTGTTGCATATGTTGTGACTGATTGGGGCAGGGATCCTTACAGCTTTGGTGCTTACTCTTATGTTGCTGTTGGGGCATCAGGAGAAGACTATGATATCATAGGAAGACCAGTTGATAACTGCTTGTTTTTTGCTGGTGAAGCAACCTGCAAAGAGCACCCTGATACTGTCGGTGGTGCAATGATGAGTGGACTACGCGAGGCTGTTCGCATGATTGACATATTGAACACTGGAAAGGATAATACTGCAGAAGTAGAAGCATTGGAAGCTGCACAAGGACAGTTGGACACCGAAAGGAATGAAGTTAGGGACATAATGAAGAGACTGGATGCAGTTGAGCTTTCTAACATATTGTATAAGAACTCCTTTGAGGGGGCTCAAATCGTAACCCGGGAAGCTTTATTAAGGGAAATGTTCCTCAATGTGAAAACCAATGCTGGGCGCTTGCATGTGGCCAAACAGTTGCTAAGTCTTCCTGTTGGAAACTTGAAGTCCTTTGCTGGAAGTAAGGAGGGGCTAGCTGTTCTCAACTCATGGATACTGGACTCAATGGGCAAGGATGGTACCCAACTCTTGAGGCACTGTTTGCGTCTTCTTGTGCGTGTATCGACTGATCTAGCTGCTATACGCTTATCAGGtaGAATGGGAAAAACAGTGAAGGAAAAAGTTTGTGTACATACCAGCCGTGATATTCGAGCTATAGCTAGTCAATTGGTCAATGTTTGGCTTGAAATTTTCCGTAAGGAAAAAGCTTCTAATGGGGGATTAAAATTGTCTAGACAAGCAACTAGTGTAGAATTATCAAAGAGAAAATCTTTAAAAGATTCAGCCTCAGGAAAGCCTCCTCTAAGCACACATCAGGGTGCTGTTGAGAATAAAGGAGGCTTGCTGAATCCTCTATCTGCTGGAAGCAATTCACCTTCCACCACACATGCAAAGAAATCACACAACAAACAAGGAAGACAACAATCAGCATGTGACTCAAGGCATGAAGTCAGTTCTTCCAGGTCACAAGGTTCAATAGACAAAATAGTTACTAAGGAGGATAATAACCACTATGCTATGTCTGAAGAAGAAAAGGCTGCTATAGCTGCTGCAGAAGCTGCGCGTACTAAAGCAATTGCTGCTGCTGAGGCATATGCCTCTGCAGAAGCTAGGTGCAGTACTCTGTTACAGCTTCCGAAGATACCCTCATTCCATAAATTTGCTAGACGGGAGCAGTATTCACAAAATGATGAGTGTGATAGTAGGAAAAAGTGGCCTGGTGGTTTTTTGGGAAGGCAAGATTGTGTTTCTGAGATCGACTCTAGGAATTGCAGAGTTAGGGACTGGTCTGTTGATTTTTCCACTGCTTGTGTTAATCTTGATAATTCTAAAATACCAGTTGACAACCTCTCCCAGAGGAGTCATTCGAATGAGATCGCCAGCCAGTTGAATTTCGGAGAGCGCTCAGGAGAAAGTGCTGCTGTGGACAGCAATCTATATACAAAAGCTTGGATTGACACAGCTGGTGGTGGGGCAGTAAAAGACCATCTGGCCATAGAGAGATGGCAATCTCAAGCAGCTGAAGCTGATTCATATTTTTCTAATCCAACAATTCATTTGAAGGATGAGGAGGATTCAAACGCCTATTCAAGGTTACCTAGCTGGAACCACGATGGTGTAGCAAATGAGAGCTCTGTTTCCCAGGTTACTGTAAATAAGGATGCCTTCAAAGGTCATTCTCGAGGAGCAGATCATATTAAACAGGCCGTTGTTGACTATGTTGGATCACTACTACTACCCCTTTATAAGGCTAGGAAGCTAGACAAGGATGGTTACAAGGCAATAATGAAGAAAAGTGCAACAAAGGTCATGGAGCAAGCAACAGACGCAGAAAAGGCCATGGCTGTTCGTGAGTTTCTAGATTTTAAGCGAAAGAATAAGATTCGCTCCTTTGTGGATATATTGATAGAGAGACATATGGCAACAAAACCGCATAGAAAATCTTAA 5703 0.417 MEGEDLRSGTKKHRKRSKPIEIGFDSDNDEPIGSLFKFKRNKKKVSFASEEDSVREKGDFRGMDDNDTLASFRKRLKGPKRDQGSENVSVEGHGDGLVVGGSGSRTKGEKGVDLLLGDDDMQLHQSSDQHMEEDSLSAIFHKAQSNSVRKSRGALSSKQKKGNRNVDSGLNCGSKSFTENVDSVVESRSGSVSVLKLVERNLVSDMICSVSAMDNQKGGDDCFQEEKSKDICDSNILDGPLVDHSNSIIACVEDRQQLSSVKVEMVCGASDEKVALQERMPDNGLNQCSAMLRDIEISDTASPSKVGEGVCGFSEAGRLENRLTNEIAEEQVCNGVSTSAGKEISLTCNTEPLIKSNENILNENNAMDSGKTFQESSINEGMKLEIGFVSGRNCYDYSSVDINAEVQDVVVGCSSEKHDGIDIGSLSSIVPNDAIKSELVVQSNHPDKLLEVCNIPKNSTASILKCSSVLDPIQSDGSSIQSSIPDENGNTAEYHASMSDFADIGGKISGIPRATRKTKMHKHGDMTYEGDADWEILINDKALNESQGAADGERTHRTRAKQDSSLNPVEDSENVAVAAVSAGLKACAAGPIEKLKFKEILKRKGGLKEYLDCRNKILSLWSSDVTRILPLAECGVSDIRSEDENPRSSLIREVYAFLDQYGYINIGVASQKENVESSARHCYKLVKEKGFEESSAASLVDSEDGVSFIVGQTKMSYDSMEINNGLLKDFEDLTTEAPEGMMHVNEAMTDPSNLTQLDRKNFDYQDNNVGIQDGVSGIIHFNANSSVPSFKFSDCRLSSLVATKQSNESKCVKQHALGDTLQSDSDARKRVIIIGAGPAGLTAARHLKRQGFTVTVLEARNRIGGRVFTDRSSLSVPVDLGASIITGVEADVATERRPDPSSLVCAQLGLELTVLNSDCPLYDIVTGQKVPADMDEALEAEYNSLLDDMVLVVARKGEHAMKMSLEDGLEYALKIRRMGHSEGSEETKQSNSEDRPFDSKREGAMEQNFDEEILDPQERRVMDWHFAHLEYGCAALLKEVSLPYWNQDDVYGGFGGAHCMIKGGYSNVVESLGEGLAVHLNHVVTNVSYGIKEPGQNYKVKVSTLNGNEFFGDAVLTTVPLGCLKAETIQFSPSLPEWKYSSIQRLGFGVLNKVVLEFPTVFWDDSVDYFGATAEERSKRGHCFMFWNVKKTVGAPVLIALVVGKSAIDGQSLSSSDHVNHALKVLRKLFGEASVPDPVAYVVTDWGRDPYSFGAYSYVAVGASGEDYDIIGRPVDNCLFFAGEATCKEHPDTVGGAMMSGLREAVRMIDILNTGKDNTAEVEALEAAQGQLDTERNEVRDIMKRLDAVELSNILYKNSFEGAQIVTREALLREMFLNVKTNAGRLHVAKQLLSLPVGNLKSFAGSKEGLAVLNSWILDSMGKDGTQLLRHCLRLLVRVSTDLAAIRLSGRMGKTVKEKVCVHTSRDIRAIASQLVNVWLEIFRKEKASNGGLKLSRQATSVELSKRKSLKDSASGKPPLSTHQGAVENKGGLLNPLSAGSNSPSTTHAKKSHNKQGRQQSACDSRHEVSSSRSQGSIDKIVTKEDNNHYAMSEEEKAAIAAAEAARTKAIAAAEAYASAEARCSTLLQLPKIPSFHKFARREQYSQNDECDSRKKWPGGFLGRQDCVSEIDSRNCRVRDWSVDFSTACVNLDNSKIPVDNLSQRSHSNEIASQLNFGERSGESAAVDSNLYTKAWIDTAGGGAVKDHLAIERWQSQAAEADSYFSNPTIHLKDEEDSNAYSRLPSWNHDGVANESSVSQVTVNKDAFKGHSRGADHIKQAVVDYVGSLLLPLYKARKLDKDGYKAIMKKSATKVMEQATDAEKAMAVREFLDFKRKNKIRSFVDILIERHMATKPHRKS 1900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03563 1900 MobiDBLite consensus disorder prediction 980 1003 - -
Car04g03563 1900 Pfam SWIRM domain 591 665 IPR007526 GO:0005515
Car04g03563 1900 ProSiteProfiles SWIRM domain profile. 575 675 IPR007526 GO:0005515
Car04g03563 1900 SUPERFAMILY FAD/NAD(P)-binding domain 828 1311 IPR036188 -
Car04g03563 1900 MobiDBLite consensus disorder prediction 1 112 - -
Car04g03563 1900 MobiDBLite consensus disorder prediction 32 88 - -
Car04g03563 1900 Coils Coil 1325 1345 - -
Car04g03563 1900 MobiDBLite consensus disorder prediction 1535 1578 - -
Car04g03563 1900 Gene3D - 831 1307 IPR036188 -
Car04g03563 1900 MobiDBLite consensus disorder prediction 1504 1583 - -
Car04g03563 1900 MobiDBLite consensus disorder prediction 545 569 - -
Car04g03563 1900 Gene3D - 937 1264 - -
Car04g03563 1900 SUPERFAMILY FAD-linked reductases, C-terminal domain 1147 1258 - -
Car04g03563 1900 Gene3D - 574 680 IPR036388 -
Car04g03563 1900 Pfam Flavin containing amine oxidoreductase 839 1309 IPR002937 GO:0016491
Car04g03563 1900 MobiDBLite consensus disorder prediction 550 566 - -
Car04g03563 1900 MobiDBLite consensus disorder prediction 142 171 - -
Car04g03563 1900 SUPERFAMILY Homeodomain-like 573 670 IPR009057 -
Car04g03563 1900 PRINTS Adrenodoxin reductase family signature 853 866 - -
Car04g03563 1900 PRINTS Adrenodoxin reductase family signature 830 852 - -
Car04g03563 1900 PANTHER FLAVIN MONOAMINE OXIDASE 502 1896 - -
Car04g03563 1900 PANTHER LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 3 502 1896 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03563 Car-Chr4 64764370 64773420 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI or SNF-SWI3 Car04g03563 Amino_oxidase 5.8e-106 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03563 04 64764370 64773420 Car04g03563 04 64764370 64773420 ECH