Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03560 ATGAACGCAATTCGATCCCGTTGGTTAGCAAGAATGGCAGCAGAAGAAAGTGCAAAAACCAGCGTCCAATCTCGTGGTGGTTTCTGGCCTTTTCTCCTTCGTTGGGTTCCCACTTCCACCGACCACATCATCAATTCCGAGAACCGCCTTCTTTCTCTTCTCAAGACTCCATATGTTCAAGAAAAAGTTAATATAGGCTCTGGTCCACCTGATTCAAAAGTGAGGTGGTTCCGTTCATCTAGCAATGAGCCACGGTTTATTAACACCGTTACTTTTGATGCTAAAGATGATTCTCCTACGCTGGTGATGGTTCATGGTTATGCAGCATCACAAGGTTTCTTCTTTCGTAATTTTGATGCTCTTGCCTCGCGTTTTAGGGTCATCGCTATTGATCAACTTGGTTGGGGTGGATCTAGCAGGCCAGACTTTACATGCAAAAGCACTGAAGAAACCGAGGCTTGGTTCATTGATTCTCTTGAGGAATGGAGGAAAGCCAAAAACCTGGGCAAATTTATTCTGCTTGGGCATTCTTTTGGTGGTTATATTGCTTCCAAATATGCACTTAAGCACCCAGAGCATGTACAACACTTGGTTTTGGTGGGATCTGCTGGATTTTCGTCAGAAACAGAGAGGATTACAAAGTTCTTATCAACATGGAAGGGATCAATCCTGAACCAAATATGGGAATCCAATTTGACACCTCAGAAAATTATCAGAGGTTTAGGTCCTTGGGGTCCTGATTTAGTCCGCAAGTATACTAGTGCTAGGTTTGTCAAATACTCAACTGGAGAACTGTTGACAGAATCTGAATCGAATTTACTTACAGATTATGTTTATCATACGTTAGCAGCCAAAGCTAGTGGCGAGCTGTGCTTAAAATATATTTTTTCATTTGGAGCATTTGCCAGATCACCTCTTCTACACAGTGCCCCAGAGTGGAAAGTGCCCACCACTTTCATATATGGTTTCGATGACTGGATGAATTACGAAGGGGCCCAAGAAGCTCGCAAGCATATGAAGGTTCCATGCGATATTATTCGGGTTCCACAGTCCGGGCATTTTGTGTTCATTGAAAACCCATCTGCCTTCCATTCAGCTGTGTTTTATGCTTGTCGAAGGTTTCTTAGTCTCGATCCCGACAGTGAATCCCTTCCCGAAGGGCTAACCTCTGCATAG 1176 0.4371 MNAIRSRWLARMAAEESAKTSVQSRGGFWPFLLRWVPTSTDHIINSENRLLSLLKTPYVQEKVNIGSGPPDSKVRWFRSSSNEPRFINTVTFDAKDDSPTLVMVHGYAASQGFFFRNFDALASRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSLEEWRKAKNLGKFILLGHSFGGYIASKYALKHPEHVQHLVLVGSAGFSSETERITKFLSTWKGSILNQIWESNLTPQKIIRGLGPWGPDLVRKYTSARFVKYSTGELLTESESNLLTDYVYHTLAAKASGELCLKYIFSFGAFARSPLLHSAPEWKVPTTFIYGFDDWMNYEGAQEARKHMKVPCDIIRVPQSGHFVFIENPSAFHSAVFYACRRFLSLDPDSESLPEGLTSA 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03560 391 Gene3D alpha/beta hydrolase 85 371 IPR029058 -
Car04g03560 391 PANTHER RE40534P-RELATED 24 378 - -
Car04g03560 391 PRINTS Alpha/beta hydrolase fold signature 124 139 IPR000073 -
Car04g03560 391 PRINTS Alpha/beta hydrolase fold signature 173 186 IPR000073 -
Car04g03560 391 PRINTS Alpha/beta hydrolase fold signature 187 200 IPR000073 -
Car04g03560 391 PANTHER BNAA01G13630D PROTEIN 24 378 - -
Car04g03560 391 PRINTS Epoxide hydrolase signature 124 139 IPR000639 GO:0003824
Car04g03560 391 PRINTS Epoxide hydrolase signature 173 186 IPR000639 GO:0003824
Car04g03560 391 PRINTS Epoxide hydrolase signature 187 200 IPR000639 GO:0003824
Car04g03560 391 PRINTS Epoxide hydrolase signature 315 331 IPR000639 GO:0003824
Car04g03560 391 PRINTS Epoxide hydrolase signature 348 370 IPR000639 GO:0003824
Car04g03560 391 SUPERFAMILY alpha/beta-Hydrolases 89 367 IPR029058 -
Car04g03560 391 Pfam alpha/beta hydrolase fold 99 211 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03560 Car-Chr4 64747228 64750738 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03560 04 64747228 64750738 Car04g03560 04 64747228 64750738 ECH
Car04g03560 04 64747228 64750738 Car05g03254 05 77272764 77278290 PCT