Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03551 ATGTCTTCACTGATTTCACCACCACCTTCATTTCTCAACATTCATTTACGCGAAACTCGCTTCTTCTCCACTCCCTTGTTTCTACTTCCACCAAGGAGCATCGAATTCAAACACAAACACAAATTAAAATGGAAAACGGTAGAGTGCAGAGTAACGAACTTAAACACGTCACCGTCAACGGCGTTAACAAAGGAACCTCACAAATTCTTCGACCACGTAATCATAACCGTTCGTGGAGGAGACGGAGGTCACGGAGCGATACTGAATCAGAAACCGAAAAAGGAAGTTGAAAAAGGAAAATCGaatagtaataataacaataataagaagaaAAGTTCGTTGAAGCGAGATTTCGATGGTTCTCTTATACTACCAATGGGTGGACATGGTGGTGATGTTGTTATATATGCAGATGAGAGTAAAGACACGTTGTTAGAGTTTCATAATAAGAACCGATTTAACGCTAAACGTGGTGGCAATGTTGATGCAGTTGGTGTATTCACTTCTTACTTGCGGAATGGAATTTCTGCTCCTATTGTTCGTATTCCTGTTCCTTTAGGTACAGTTGTGAAAAGCAAACGGGGAAAGATGTTGGCGGATTTAGCACGACCTGGTGATGAAGTTCTTGTTGCGAGGGGTGGACAAGGAGGGATTAGCTTGTTAGAAATGCCAAGGGATAAAAAGAAAAGGATGATGAGTTTGATGACTAATGTGATGAGAGATGACTCGGATAAGGTTTTAGTTCACGGTCAACCTGGGGAGGAAGTTAAGCTGGAGTTGATCCTACGAGTTGTAGCTGACGTTGGTTTGATTGGACTTCCAAATGCTGGGAAATCGACGCTTCTGGCAGCCATTACACTCGCAAAACCTGACATAGCTGATTATCCTTTTACAACATTAATGCCAAATCTTGGACGCCTTCCTGGCGATCCCAACTTGGGAGCAGGGATGTATTCGTCTGAAGCGACACTGGCAGATTTGCCTGGTCTTATAGAAGGTGCTCACTTGGGAAAGGGTCTCGGTCGCAATTTTTTGAGGCACCTTAGGAGGACCCGGCTATTGGTCCATGTTGTTGATGCAGCTACTGAAAATCCTATAAATGACTACAGAACTGTCAGAGAAGAGTTGCGCATGTATAATCCCGAGTACCTTGAACGACCGTACATTGTTGTTTTGAATAAGATTGACCTGCCAGAGGCTAAGGATAGGCTTCCAACATTGACTCAAGAAATTCTGAGGATTGGAAGTGATGGTGGTGCTTCTGAACCAGAACCAGGTTCTGAAATTTCTGCTCAATTATTGTCTGATGAAAGCGGCAGAAAGGAAACACAACTTGAAGACTATCCAAGACCTCACTCTGTTGTTGGAGTTAGTGTTCTGAAGGGTGTCAGGATTAAGGAGATGTTAAAGGAGATAAGGTCCGCTTTAAGGCTGTGCTTAGATTCTAATGTAACATCGGCTTCCAGTGTGCCACCGTGA 1479 0.4293 MSSLISPPPSFLNIHLRETRFFSTPLFLLPPRSIEFKHKHKLKWKTVECRVTNLNTSPSTALTKEPHKFFDHVIITVRGGDGGHGAILNQKPKKEVEKGKSNSNNNNNKKKSSLKRDFDGSLILPMGGHGGDVVIYADESKDTLLEFHNKNRFNAKRGGNVDAVGVFTSYLRNGISAPIVRIPVPLGTVVKSKRGKMLADLARPGDEVLVARGGQGGISLLEMPRDKKKRMMSLMTNVMRDDSDKVLVHGQPGEEVKLELILRVVADVGLIGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLPGDPNLGAGMYSSEATLADLPGLIEGAHLGKGLGRNFLRHLRRTRLLVHVVDAATENPINDYRTVREELRMYNPEYLERPYIVVLNKIDLPEAKDRLPTLTQEILRIGSDGGASEPEPGSEISAQLLSDESGRKETQLEDYPRPHSVVGVSVLKGVRIKEMLKEIRSALRLCLDSNVTSASSVPP 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03551 492 CDD Obg 266 411 IPR031167 GO:0005525
Car04g03551 492 Pfam 50S ribosome-binding GTPase 267 394 IPR006073 GO:0005525
Car04g03551 492 PANTHER DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED 45 483 IPR045086 GO:0003924|GO:0005525
Car04g03551 492 MobiDBLite consensus disorder prediction 83 114 - -
Car04g03551 492 SUPERFAMILY Obg GTP-binding protein N-terminal domain 68 227 IPR036726 -
Car04g03551 492 Gene3D GTP1/OBG domain 68 264 IPR036726 -
Car04g03551 492 Gene3D - 265 480 IPR027417 -
Car04g03551 492 ProSitePatterns GTP1/OBG family signature. 326 339 IPR006074 GO:0005525
Car04g03551 492 PRINTS GTP1/OBG GTP-binding protein family signature 268 288 IPR006073 GO:0005525
Car04g03551 492 PRINTS GTP1/OBG GTP-binding protein family signature 289 307 IPR006073 GO:0005525
Car04g03551 492 PRINTS GTP1/OBG GTP-binding protein family signature 324 339 IPR006073 GO:0005525
Car04g03551 492 PRINTS GTP1/OBG GTP-binding protein family signature 341 359 IPR006073 GO:0005525
Car04g03551 492 PANTHER GTP-BINDING PROTEIN OBGC2-RELATED 45 483 - -
Car04g03551 492 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 267 476 IPR027417 -
Car04g03551 492 ProSiteProfiles Obg domain profile. 67 265 IPR006169 -
Car04g03551 492 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 266 477 IPR031167 GO:0005525
Car04g03551 492 Pfam GTP1/OBG 127 263 IPR006169 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03551 Car-Chr4 64650628 64654728 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03551 04 64650628 64654728 Car04g03551 04 64650628 64654728 ECH