Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03550 ATGGACGTTGATCCTCGCCAATACGAAAACACTGCTATAAATGAAAAAGACGTCCCAAACATTGTTATGTCATATCTTATACATAATTGCTACGAGGAATCAGCAGAGTCATTCATTGCCAGCACTGGGTCGAAGCGGCCTACAGATTATTTGGATAACATGGAGAAAAGAAAAAAAATCTTCCACTATGCACTGGAGGGAAATGCACTTAAGGCTATTGAGCTCACTGAGCAGCTGACACCAGATATTCTGGAAAAGAATAAGGATTTGCTGTTTGATCTTCTAAGCCTTCATTTTGTAGAGCTTGTCCGCTCTAGGAAATGCACAGAAGCTTTGGAGTTTGCTCAGACCAAGTTGAGCCCTTTTGGGAAGGAGGCAAAATATATGGAAAAACTTGAAGATTTTATGGCCCTTCTTGCTTATAAGGAACCGGAGAAATCCCCAATGTTTCATTTGCTTAGCTTGGAATACCGTCAACAGTTTGCAGACAGTTTGAATAGAACTATCCTTGCATACTTTAACCTTCCCAGCTACACAGCAATGGAGAGGCTTATACAGCAGGCGACACTAGTTAGACAATGCTTAAATGAGGAGGCTGGAAAGGCTATCTAG 612 0.415 MDVDPRQYENTAINEKDVPNIVMSYLIHNCYEESAESFIASTGSKRPTDYLDNMEKRKKIFHYALEGNALKAIELTEQLTPDILEKNKDLLFDLLSLHFVELVRSRKCTEALEFAQTKLSPFGKEAKYMEKLEDFMALLAYKEPEKSPMFHLLSLEYRQQFADSLNRTILAYFNLPSYTAMERLIQQATLVRQCLNEEAGKAI 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03550 203 Pfam CTLH/CRA C-terminal to LisH motif domain 54 191 IPR024964 -
Car04g03550 203 PANTHER VACUOLAR IMPORT AND DEGRADATION PROTEIN 30 8 201 - -
Car04g03550 203 SMART ctlh 53 110 IPR006595 -
Car04g03550 203 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 53 110 IPR006595 -
Car04g03550 203 SMART Lish 14 46 IPR006594 GO:0005515
Car04g03550 203 SMART toby_final6 106 201 IPR013144 -
Car04g03550 203 ProSiteProfiles LIS1 homology (LisH) motif profile. 14 46 IPR006594 GO:0005515
Car04g03550 203 PANTHER RAN BINDING PROTEIN 9-RELATED 8 201 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03550 04 64645614 64649008 Car04g03550 04 64645614 64649008 ECH