Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03549 ATGGCTGAATTAGGAGGAGATGTTATCGGTGTTCATACCGTTGACTCCTGGAAGGAACAGATCCAGAAGGGAATCGACTCCAACAAATTGATTGTGGTGGATTTTACTGCTTCATGGTGTGGACCATGCCGTTTCATTGCCCCTATTCTGGCGGAGATTGCTAAGAACACACCTCATGTCATCTTCCTCAAGGTGGATGTGGATGAATTGAAGACTGTTGCTGAGGAATGGTCTGTTGAGGCTATGCCAACATTCCTGTTCTTGAAAGAAGGCAAGAAAGTGGATAAAGTAGTTGGTGCTAAGAAGGAATTGCTGCAACAGACAATAACCAAGCATGCAACTGCAACTGTTTCAACTGCTTAA 363 0.4435 MAELGGDVIGVHTVDSWKEQIQKGIDSNKLIVVDFTASWCGPCRFIAPILAEIAKNTPHVIFLKVDVDELKTVAEEWSVEAMPTFLFLKEGKKVDKVVGAKKELLQQTITKHATATVSTA 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03549 120 PANTHER THIOREDOXIN 1 117 - -
Car04g03549 120 ProSitePatterns Thioredoxin family active site. 32 50 IPR017937 -
Car04g03549 120 PANTHER THIOREDOXIN 1 117 - -
Car04g03549 120 PRINTS Thioredoxin family signature 31 39 - -
Car04g03549 120 PRINTS Thioredoxin family signature 39 48 - -
Car04g03549 120 PRINTS Thioredoxin family signature 78 89 - -
Car04g03549 120 SUPERFAMILY Thioredoxin-like 6 113 IPR036249 -
Car04g03549 120 Gene3D Glutaredoxin 2 119 - -
Car04g03549 120 ProSiteProfiles Thioredoxin domain profile. 1 114 IPR013766 -
Car04g03549 120 CDD TRX_family 19 109 - -
Car04g03549 120 TIGRFAM thioredoxin: thioredoxin 19 112 IPR005746 GO:0015035
Car04g03549 120 Pfam Thioredoxin 11 110 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03549 Car-Chr4 64642576 64644616 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03549 04 64642576 64644616 Car04g03549 04 64642576 64644616 ECH
Car04g03549 04 64642576 64644616 Car05g03237 05 77120433 77122379 PCT