Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03548 ATGGAAACCAACTCAGTTTCCAAGCTTCTTTCTTTATTCTTTTTTCTCTTTTTTGTGTGTTCTCAGTTGATTCATTGTAGTGTGACATATGATAGAAAAGCCATTATCATCAATGGACAAAGAAGAATCCTTATTTCTGGTTCCATTCATTATCCAAGAAGCACTCCTGAAATGTGGGAGGATCTGATTCAGAAAGCAAAAGTTGGAGGCTTGGATGTTATTGACACTTATGTGTTTTGGAATGTTCATGAACCTTCTCCTAGCAATTACAATTTTGAAGGAAGGTACGATCTGGTACGGTTCATTAAGACTGTGCAAAAAGTGGGACTTTATGTCCATCTTCGGATTGGACCTTATGTTTGTGCTGAATGGAATTTTGGAGGATTTCCTGTTTGGTTGAAGTATGTTCCTGGGATCAGTTTCAGAACAGATAATGGCCCTTTTAAGGCTGCAATGCAAGGTTTCACTCAGAAAATTGTTCAGATGATGAAGAATGAAAAGCTATTTCAATCTCAAGGTGGTCCAATTATTCTTTCTCAGATTGAGAATGAGTATGGACCACAAGGAAGGGCATTGGGAGCTGTTGGTCATGCATACTCAAACTGGGCTGCAAAGATGGCTGTTGGATTGGGTACAGGAGTCCCTTGGGTGATGTGTAAGGAAGATGATGCCCCAGATCCAGTTATAAATTCATGCAATGGTTTTTACTGTGATGATTTCTCTCCCAATAAACCATACAAGCCTAAACTATGGACTGAGTCTTGGAGTGGCTGGTTTTCAGAATTCGGTGGACCGGTTCCTCAGCGACCAGCTCAGGATCTAGCATTCGCAGTTGCTCGTTTCATACAAAAGGGTGGCTCATTTTTTAACTATTACATGTACCACGGAGGAACTAATTTCGGACGATCAGCTGGAGGACCATTCATAACTACAAGCTATGACTATGACGCGCCAATTGACGAATATGGTTTGCTAAGGGAACCTAAATATGGTCATTTGAAGGACCTTCATAAAGCTATCAAACAATGTGAACATGCTTTGGTTTCTTCAGATCCCACTGTTACATCATTAGGAGCATATGAACAGGCACATGTATTCTCTTCAGGAACACAAACATGTGCAGCTTTTCTAGCAAACTATCATTCAAACTCTGCGGCGAGAGTGACCTTCAATAACAGACACTATGACTTGCCTCCTTGGTCCATAAGCATCCTACCTGATTGTAAAACTGATGTATTCAACACTGCAAGAGTGAGGTTTCAAAATTCAAAAATACAAATGTTGCCTAGCAATTCAAAGTTGTTGTCATGGGAGACTTATGATGAAGATGTATCTTCGCTAGCTGAAAGTTCCAGAATCACAGCTTCTGGACTTCTAGAACAGATAAATGCCACAAGAGATACTAGTGACTATCTTTGGTACATAACCAGTGTTGACATAAGTCCATCAGAATCGTTTCTCCGAGGAGGGAACAAGCCCAGCATTAGTGTACATTCTTCTGGCGACGCTGTCCACGTGTTTATTAATGGGAAATTTTCAGGCTCAGCTTTCGGAACAAGGGAACAAAGAAGTTGCACATTTAATGGCCCTATCAACCTACACGCCGGAACAAATAAAATAGCGCTTCTCAGTGTAGCTGTTGGATTGCCTAATGGTGGAATCCATTTCGAATCATGGAAGACGGGAATCACAGGTCCAATTTTGCTCCATGGTCTCGACCACGGACAGAAAGATTTGACATGGCAGAAATGGTCATATCAGGTTGGCCTAAAAGGAGAAGCTATGAATTTGGTGTCTCCGAATGGCGTCTCATCTGTTGATTGGGTGAGAGAGTCACTAGCTTCACAAAACCAGCCACAGTTGAAATGGCATAAGGCTTATTTCAATGCACCTGATGGAAATGAAGCATTGGCTTTGGACATGAGTGGTATGGGAAAGGGTCAAGTATGGATCAATGGACAAAGCATAGGAAGATATTGGTTGGTTTATGCAAAGGGTAACTGCAATTCTTGTAACTATGCTGGGACGTATCGGCAGGCGAAGTGCCAACTTGGTTGTGGACAACCTACTCAAAGATGGTACCATGTTCCAAGGTCTTGGTTAAAGCCAACAAATAACTTGATGGTAGTTTTTGAGGAATTAGGAGGGAATCCTTGGAAAATATCTCTGGTAAAGAGAACAATACATACTCCAGCATCAAGTGAACCAAATTTAAGAACTAATACAACACAAGTATAA 2238 0.412 METNSVSKLLSLFFFLFFVCSQLIHCSVTYDRKAIIINGQRRILISGSIHYPRSTPEMWEDLIQKAKVGGLDVIDTYVFWNVHEPSPSNYNFEGRYDLVRFIKTVQKVGLYVHLRIGPYVCAEWNFGGFPVWLKYVPGISFRTDNGPFKAAMQGFTQKIVQMMKNEKLFQSQGGPIILSQIENEYGPQGRALGAVGHAYSNWAAKMAVGLGTGVPWVMCKEDDAPDPVINSCNGFYCDDFSPNKPYKPKLWTESWSGWFSEFGGPVPQRPAQDLAFAVARFIQKGGSFFNYYMYHGGTNFGRSAGGPFITTSYDYDAPIDEYGLLREPKYGHLKDLHKAIKQCEHALVSSDPTVTSLGAYEQAHVFSSGTQTCAAFLANYHSNSAARVTFNNRHYDLPPWSISILPDCKTDVFNTARVRFQNSKIQMLPSNSKLLSWETYDEDVSSLAESSRITASGLLEQINATRDTSDYLWYITSVDISPSESFLRGGNKPSISVHSSGDAVHVFINGKFSGSAFGTREQRSCTFNGPINLHAGTNKIALLSVAVGLPNGGIHFESWKTGITGPILLHGLDHGQKDLTWQKWSYQVGLKGEAMNLVSPNGVSSVDWVRESLASQNQPQLKWHKAYFNAPDGNEALALDMSGMGKGQVWINGQSIGRYWLVYAKGNCNSCNYAGTYRQAKCQLGCGQPTQRWYHVPRSWLKPTNNLMVVFEELGGNPWKISLVKRTIHTPASSEPNLRTNTTQV 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03548 745 SUPERFAMILY Galactose-binding domain-like 402 573 IPR008979 -
Car04g03548 745 Pfam Beta-sandwich domain in beta galactosidase 347 418 IPR041392 -
Car04g03548 745 PRINTS Glycosyl hydrolase family 35 signature 38 55 IPR001944 GO:0004553|GO:0005975
Car04g03548 745 PRINTS Glycosyl hydrolase family 35 signature 59 77 IPR001944 GO:0004553|GO:0005975
Car04g03548 745 PRINTS Glycosyl hydrolase family 35 signature 114 133 IPR001944 GO:0004553|GO:0005975
Car04g03548 745 PRINTS Glycosyl hydrolase family 35 signature 171 186 IPR001944 GO:0004553|GO:0005975
Car04g03548 745 PRINTS Glycosyl hydrolase family 35 signature 250 265 IPR001944 GO:0004553|GO:0005975
Car04g03548 745 PRINTS Glycosyl hydrolase family 35 signature 287 302 IPR001944 GO:0004553|GO:0005975
Car04g03548 745 PRINTS Glycosyl hydrolase family 35 signature 307 323 IPR001944 GO:0004553|GO:0005975
Car04g03548 745 PRINTS Glycosyl hydrolase family 35 signature 619 633 IPR001944 GO:0004553|GO:0005975
Car04g03548 745 PRINTS Glycosyl hydrolase family 35 signature 646 662 IPR001944 GO:0004553|GO:0005975
Car04g03548 745 PANTHER BETA-GALACTOSIDASE 3 733 - -
Car04g03548 745 PANTHER BETA-GALACTOSIDASE RELATED 3 733 IPR001944 GO:0004553|GO:0005975
Car04g03548 745 SUPERFAMILY Galactose-binding domain-like 582 729 IPR008979 -
Car04g03548 745 Pfam Glycosyl hydrolases family 35 35 339 IPR031330 -
Car04g03548 745 Gene3D - 442 586 - -
Car04g03548 745 SUPERFAMILY (Trans)glycosidases 27 344 IPR017853 -
Car04g03548 745 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 173 185 IPR019801 GO:0004553|GO:0005975
Car04g03548 745 Gene3D Glycosidases 21 343 - -
Car04g03548 745 Gene3D - 594 732 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03548 Car-Chr4 64637106 64641856 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03548 04 64637106 64641856 Car04g03548 04 64637106 64641856 ECH
Car04g03548 04 64637106 64641856 Car05g03236 05 77114835 77120339 PCT