Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03543 ATGGGTTCAGCTTGTTGTGTTGCTGCAAAAGATCGTAGAGATCTTGAAAGTGTGCATAGAGATGTTGTATGTTCGCCATCATGGAGCTTTCGATGGGATAGTCGGGGGCGTGTTACTGGTGAAATTGAGAATCCTTCCTATCACACGTCTCATGTAGTAAGCAGAAATCTCAGCATGGAGTTTAAAGGCTCATTAAGTACTGAAAGAGGTAATTTATCTGATGGGGGAAGCATCCTGGACAATTCTGCAACTCCTGTTTCCCTGAAGTCTCCTGTCGACGAGGCATTGGCTGCAAATATGATGACACCATCTTCTGATCTGTCCATGTCAAGCAATTTTTCTACAGTGGTGAAGAATCCGGGAGAATCTTCAATACCAAATCATTCATTTTCAATACCTTCAGTTTTCTCAACACCTACACCGGATCCTTTATCTAATCATGATTATCATCATCTTTCCAATTCTACCCCAACTAGATGGGCACATCGATCTCTGGGGCACCCACTGTTGAGACAGATTTCTGATAATCAGATCATGGGTCTGAAATCACCAGACAGCTCAATTTTTGAAGGAAGGGTGTCATTTGTACTCTCCACTTGCAGCAATGAAATTGAAGCTGGATCACAATGTGGATCGTCTGATGGCTGGTCGATGCACACCTCCGAGCTGGTTGCCTCCTGGCAAAGGGGGAGGTGGTCTTTTGACAGTGAGTGTTTAGGCTCGGGCCGTCACAAGATAAGTGGATCTAGTAGCAGGTTGTCATATTCACCTTCCATGGATCTACAATCTTGTGCGGCTTGCTCTAAGCTTTTGTCTGAGAGATCGGCATGGAACAGCCAGAAGTTTATTGCCAACGGTGACCTCTCAGTTGTTGCTGTACTGGTCTGTGGTCATGCATATCATGCAGAATGCTTAGAGACTATGACCGCAGAAGCAGATAGCTATGATCCATCTTGTCCAATTTGTATGGTTGGTGGCGATAAGAACTTTTCAAAGTTGCCCAGAAAAGGTCAGACTGAATCAGAGATTAAAACCAAAAACCTCAAGATATCCAGAAATCGTGTAGTTGATAGCTACCTTGATGGTGGTTTTGATGTTTTTGATCGCCAAAAAGATGTTGAACCGGAAGGAAAAGTTTCGAAGATGGAGGCTAGCTCGAGTGTGAGGAGCTCAGTTGGTAAGCCCTTTTTGAGGAAGCACTTTTCACTTGGTTCAAAGTGGAACCGAGCTCTGTCTGAGAATGATTCAGCCAGGAAGAAAGGCTTTTGGGCAAGATATCGAAAAGATTGA 1290 0.4419 MGSACCVAAKDRRDLESVHRDVVCSPSWSFRWDSRGRVTGEIENPSYHTSHVVSRNLSMEFKGSLSTERGNLSDGGSILDNSATPVSLKSPVDEALAANMMTPSSDLSMSSNFSTVVKNPGESSIPNHSFSIPSVFSTPTPDPLSNHDYHHLSNSTPTRWAHRSLGHPLLRQISDNQIMGLKSPDSSIFEGRVSFVLSTCSNEIEAGSQCGSSDGWSMHTSELVASWQRGRWSFDSECLGSGRHKISGSSSRLSYSPSMDLQSCAACSKLLSERSAWNSQKFIANGDLSVVAVLVCGHAYHAECLETMTAEADSYDPSCPICMVGGDKNFSKLPRKGQTESEIKTKNLKISRNRVVDSYLDGGFDVFDRQKDVEPEGKVSKMEASSSVRSSVGKPFLRKHFSLGSKWNRALSENDSARKKGFWARYRKD 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03543 429 ProSiteProfiles Zinc finger RING-type profile. 264 322 IPR001841 -
Car04g03543 429 PANTHER C3HC4-TYPE RING ZINC FINGER PROTEIN 1 423 - -
Car04g03543 429 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 244 324 IPR013083 -
Car04g03543 429 SMART ring_2 264 322 IPR001841 -
Car04g03543 429 SUPERFAMILY RING/U-box 263 324 - -
Car04g03543 429 PANTHER EXPRESSED PROTEIN 1 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03543 Car-Chr4 64578190 64582600 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03543 04 64578190 64582600 Car04g03543 04 64578190 64582600 ECH