Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03542 ATGTCAGGTCCTCTTGATCGTTTCGCTCGTCCATGTTTTGAAGGTTTCTCTGGTCATCATGACGAAAGAAGAGAGCGAAAATCAGATTTTGAGAATTCAGAAGATGATCGGCGCACAAGAATTGGAAGTTTAAAGAAGAAAGCGATAAATGCATCAAGTAAATTCAGGCATTCTCTTAGGAAGAAAAGCAGGAGAAAGAATGCGAGTCGGAGTAATTCTGTTTCAATCGAGGATGTTCGAGATGTTAAGGAGCTCCAAGCAGTGGATGCATTTAGACATACACTTATGTCTGATAACTTGTTGCCACCAAGACATGATGACTATCATATGTTGTTGAGATTCTTGAAAGCAAGGAAATTTGATATTGAGAAGGCAAAACACATGTGGGCAAACATGATCCAATGGAGGAAAGAGTATGGTACTGATACAATTATGGAGGATTTTGAGTTCAGTGAATTGGATGAAGTCCTGCAATACTATCCACATGGTTATCATGGGGTTGATAAGGAAGGAAGACCTATTTATATTGAGAGGCTAGGTAAAGTTGATCCCAATAAGCTTATGCAAGTAACTACCATGGACAGGTATTTGAAATACCATGTACAGGGTTTTGAGAAAACATTTGCTGTTAAGTTTCCTGCTTGTTCTGTTGCTGCAAAGAGACATATAGATTCAAGTACAACCATTTTAGATGTTCATGGTGTGGGTTTCAAAAACTTTACGAAGACTGCACGGGAACTCATTACGCGTCTGCAGAAAATTGACGGCGACTACTATCCCGAAacgttatgccaaatgtttataatcaatgctggtcctggtttcaagctactttggaacacagtgaaaacatttcttgatcccaaaacttcatcaaagataaatGTTCTTGGAAACAAGTTCCAGAATAAGTTGCTTGAAATTATTGATGTCAGTGAGCTGCCAGAGTTTCTTGGTGGTATTTGTACTTGTATAGATCAAGGCGGTTGTATGAGGTCTGATAAAGGGCCATGGCAAGATCCAAACATTTTAAAGATGGTTCTCAGTGGTGAAATACGATGTTCTAGACAAATAGTAACGGTTTCTAATGATGAGGGGATAGTGATTGAATGTGATAAGGCATCTTATCCAATGGGGCAGATAAGAAGTAGTGATACATCAACAGCAGAATCAGGATCTGAAGTTGAAGATATCACTTCCCCCAAAGCAAGTGGGAGTTATACAAACCCTAGGTTGACTCCTGTCCATGAAGAAGCAAGATTGGCTGGTCTTTCTGCCGGTTTCTCTGAGTATGATGAGTATGTTCCCATGGTTGACAAGACTGTAGATGTTGCATGGAAGGAGAAACAAGTGACAATCCAGAATTCATATGGCACCACAGCTGCAGAAAAATATCTGTTGAGGACTGGAGGATCCGATGGAAACCAGGCATATATCTGTGCTATTATCATTGGCTTCTTTGTTGCTATTTTTACTTTTGCCCGTTCAATAGCATTTCGTATGACTAAGAGAATAAAAGACAATGAACCTGACTCTGTCCAAAACAGGCCTAACACGATTGTTAGGGCCGCTTCAACAACCAAGGAGGAATGTCGTCCCCCATCACCTGCTCCCAGAATGACAAAGGCAGAAATCACCTCATCTGCTTTGAAACGCCTTGGTGAGCTTGAAGAGAAGGTTGAAATGCTGCAGTCAAAACCTAATGTAATGCCATCTGAGAAAGAGGAGCTCCTGAATGCTGCTGTCTATCGCGTGGATGCATTGGAAGCTGAGTTGATCACTACAAAGAAGGCTTTATACGAAGCTTTGATTAGGCAAGAAGAGCTTATGGCATACATAGACTGTCAGGAAAGAAGAAAATTTGAGAAAAAGAAGTTTTGCTGGTGGTGA 1890 0.3873 MSGPLDRFARPCFEGFSGHHDERRERKSDFENSEDDRRTRIGSLKKKAINASSKFRHSLRKKSRRKNASRSNSVSIEDVRDVKELQAVDAFRHTLMSDNLLPPRHDDYHMLLRFLKARKFDIEKAKHMWANMIQWRKEYGTDTIMEDFEFSELDEVLQYYPHGYHGVDKEGRPIYIERLGKVDPNKLMQVTTMDRYLKYHVQGFEKTFAVKFPACSVAAKRHIDSSTTILDVHGVGFKNFTKTARELITRLQKIDGDYYPETLCQMFIINAGPGFKLLWNTVKTFLDPKTSSKINVLGNKFQNKLLEIIDVSELPEFLGGICTCIDQGGCMRSDKGPWQDPNILKMVLSGEIRCSRQIVTVSNDEGIVIECDKASYPMGQIRSSDTSTAESGSEVEDITSPKASGSYTNPRLTPVHEEARLAGLSAGFSEYDEYVPMVDKTVDVAWKEKQVTIQNSYGTTAAEKYLLRTGGSDGNQAYICAIIIGFFVAIFTFARSIAFRMTKRIKDNEPDSVQNRPNTIVRAASTTKEECRPPSPAPRMTKAEITSSALKRLGELEEKVEMLQSKPNVMPSEKEELLNAAVYRVDALEAELITTKKALYEALIRQEELMAYIDCQERRKFEKKKFCWW 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03542 629 Pfam CRAL/TRIO, N-terminal domain 105 131 IPR011074 -
Car04g03542 629 MobiDBLite consensus disorder prediction 55 75 - -
Car04g03542 629 CDD SEC14 153 320 IPR001251 -
Car04g03542 629 SMART CRAL_TRIO_N_2 107 132 IPR011074 -
Car04g03542 629 Pfam CRAL/TRIO domain 158 320 IPR001251 -
Car04g03542 629 MobiDBLite consensus disorder prediction 1 43 - -
Car04g03542 629 SUPERFAMILY CRAL/TRIO domain 152 346 IPR036865 -
Car04g03542 629 SMART sec14_4 152 323 IPR001251 -
Car04g03542 629 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 152 326 IPR001251 -
Car04g03542 629 MobiDBLite consensus disorder prediction 380 411 - -
Car04g03542 629 Gene3D - 29 139 - -
Car04g03542 629 Gene3D - 140 350 IPR036865 -
Car04g03542 629 Coils Coil 546 566 - -
Car04g03542 629 MobiDBLite consensus disorder prediction 13 43 - -
Car04g03542 629 PRINTS Cellular retinaldehyde-binding protein signature 110 132 - -
Car04g03542 629 PRINTS Cellular retinaldehyde-binding protein signature 279 298 - -
Car04g03542 629 SUPERFAMILY CRAL/TRIO N-terminal domain 83 148 IPR036273 -
Car04g03542 629 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 3 625 - -
Car04g03542 629 PANTHER SEC14P-LIKE PHOSPHATIDYLINOSITOL TRANSFER FAMILY PROTEIN 3 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03542 Car-Chr4 64552893 64558513 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03542 04 64552893 64558513 Car04g03542 04 64552893 64558513 ECH