Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03517 ATGACCACCACCGCAACGATAGACGAAAACGCCGCCGCCGCCGGTGTTCGGATCCCTCGCCATCAACATCTCCTAGGTTTCCTCCGCAACGTTAAACTCAAGTACCTAAAATTAGGTTACCATTGCTTAATATCAAATCTCTTAACCCTAAGTTTAATCCCGTTAATCATAGTCACGTTAATCCAAATCTCCCAAACTAAAAACCTCAATCACCAATGGCTTTATCATCATCTCCAATACAACTACAATTTCTTCACTATTCTCACATTCTTTTGTTTCATAATCTTCGCTCTCACGCTCTACCAATTCACGCTGCCACGCGCCGTTTACCTCGTCGATTTCTCGTGTTTCCGTCCCGCCGATAACCTCAAAGCTCCTTCCCACCGTTTCATAGAACATTCTCTTCTCACCGGCGATTTCGACAATTCCTCCTTAGATTTTCAGCGCAAGATTCTCCTTCGTTCCGGTCTCGGCGACGAAACCTACGTTCCCGAAGCAATGCATTACATCCCTCCCCGTCCTTCGATCTCCACCGCGAGATCTGAAGCTGAATCCGTTATGTTTGGTGCATTGGATAATCTTTTCATTAACACTAACCTAAATCCTAAAGAAATTGGAATTCTTGTTGTGAATTGTAGTTTGTTTAACCCTACACCTTCACTTTCTTCCATGATTGTTAATAAATACAAATTGAGAAGTAACATTAGGAGTTTCAATTTAGGTGGAATGGGTTGTAGTGCTGGTGTTATAGCCATTGATCTTGCAAGAGATTTGTTGAGGGTTCATTGGAATAATACTTATGCTGTTGTTGTTAGCACTGAGAATATTACTCAAAATTGGTACTTTGGGAATAATAAATCAATGCTTATTCCCAATTGTTTGTTTAGAGTTGGTTGTTCTGCTTTGTTGCTGTCTAATAAATCTGTTGATAAAAAGAGGGCTAAGTATAAACTTGTTCACATTGTGAGGACGCATTGTGGTGCGGACGATAAGGCTTTTCGATGTGTTTATCAGGAACAGGATGATGCAGGGAAAATCGGTGTTTCATTGTCTAAAGATTTGATGGGAATTGCTAGTTTAGCACTTAAAACTAACATCACGAGACTTGGTCCTCTTGTGCTTCCGGTTACCGAGCAGCTTCTGTTTTTTGCTACTTTGATTTTGAGGAAGTTTTTTAAAGATGATGCGAAGCCTTATATACCAGATTTTAAGCTCGCGTTCGATCATTTCTGTATACATGCTGGTGGAAGGGCTGTGATTGATGAACTAGAGAAGAATCTTCAATTGCTTCCTGTCCATGTGGAGGCTTCTAGGATGACGCTTCATCGGTTCGGGAACACTTCGTCTAGCTCTATTTGGTATGAGTTGGCATATATTGAAGCTAAAGGAAGGATAAAGAAGGGTGGCAAGGTTTGGCAGATTGCATTTGGAAGTGGTTTTAAGTGTAATAGTGCTGTATGGGAGGCCCTTTGTGATGTGAGGCCTTCTCCAAATGGACCTTGGGAAGATTGCATTGATAAGTATCCTGTGGAAATACTCACATAG 1545 0.4136 MTTTATIDENAAAAGVRIPRHQHLLGFLRNVKLKYLKLGYHCLISNLLTLSLIPLIIVTLIQISQTKNLNHQWLYHHLQYNYNFFTILTFFCFIIFALTLYQFTLPRAVYLVDFSCFRPADNLKAPSHRFIEHSLLTGDFDNSSLDFQRKILLRSGLGDETYVPEAMHYIPPRPSISTARSEAESVMFGALDNLFINTNLNPKEIGILVVNCSLFNPTPSLSSMIVNKYKLRSNIRSFNLGGMGCSAGVIAIDLARDLLRVHWNNTYAVVVSTENITQNWYFGNNKSMLIPNCLFRVGCSALLLSNKSVDKKRAKYKLVHIVRTHCGADDKAFRCVYQEQDDAGKIGVSLSKDLMGIASLALKTNITRLGPLVLPVTEQLLFFATLILRKFFKDDAKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRIKKGGKVWQIAFGSGFKCNSAVWEALCDVRPSPNGPWEDCIDKYPVEILT 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03517 514 SUPERFAMILY Thiolase-like 318 488 IPR016039 GO:0016746
Car04g03517 514 PIRSF Very_long_ch_3-ktacl-CoA_syn 26 514 IPR012392 GO:0006633|GO:0016020|GO:0016747
Car04g03517 514 Gene3D - 140 489 IPR016039 GO:0016746
Car04g03517 514 CDD CHS_like 93 487 - -
Car04g03517 514 Pfam FAE1/Type III polyketide synthase-like protein 103 390 IPR013601 GO:0006633|GO:0016020|GO:0016747
Car04g03517 514 SUPERFAMILY Thiolase-like 95 311 IPR016039 GO:0016746
Car04g03517 514 PANTHER 3-KETOACYL-COA SYNTHASE 19 512 IPR012392 GO:0006633|GO:0016020|GO:0016747
Car04g03517 514 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 407 488 IPR013747 -
Car04g03517 514 PANTHER 3-KETOACYL-COA SYNTHASE 4 19 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03517 Car-Chr4 64357175 64358832 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03517 04 64357175 64358832 Car04g03517 04 64357175 64358832 ECH