Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03514 ATGGAAATGAAAATGAAGCGAGGAATAACAGTGAGTGTTGTTATGGTGATGTTGTTTTTGTTAGTTGATTTAACAATGAGTTTGAGTTTGAGTTCAAGAACTGAATGGTTTGCGTTATTGGAGCTTCGTTCATCAATGGGGATAAGGGGAAAAGAGTGGCCTAAAAAAACCGATCCGTGTCGGAACTGGACCGGTGTTGAATGCCGGAATGGTCGAGTTGTGGGTATCAGTGTATCCGGGTTGAAGAGGACTCGGTTTGGTCGACTTAACCCGGATTTTGAAGTGGATTCTCTTGCAAACTTCACACTGTTGAAGTCTTTCAATGCTTCTGGGTTCATGCTTATTGGGTCTATTCCTGAGTGGTTTGGTGAGAAACTTGGTGCACTGCAAGTACTTGATTTAAGGTCTTGTTCAATAAGTGGTGAGATTCCTGGTTCACTTGGGGGTTTGAGTAGTTTGAAGGTTTTGTTTCTTTCAGGGAATAATCTTACTGGTAGAGTTCCTTCAAATTTGGGGTTGTTATCTAGTCTTTTTATTCTTGATCTCTCTGGGAATTTGCTTTCAGGATCAGTTCCTGATTCTTTCTCTAAGCTTGGTAACCTTACAAGTCTTGATCTTTCAAATAATTACTTATCTGGGTCTATTCCACCTGAATTGGGTACCCTTTCAAATCTCCAAAATTTGGACCTTTCTAATAATGCATTCACTGCTTTGGTTCCTTCTCAGCTTGGTAATCTTTCAAAGTTGGTTGAGCTTAATCTTAGTATGAATTCTCTTTCTGGGTCGTTGCCAGATAGTTTGTTTTCTTCTAGACTTTCTGCTCTTAAAGTTATGATTTTGAGTAGAAATTCCATTAGTGGTTCTCTTCGTGATGGTTTGTGGTCAATGCCAAGCTTGCACTTTTTTGATGTATCAGGAAACAATCTCACTGGTCCACTGCCTAAAGCGTCTGGTTTAAATATTAGCTCTAACAACGGTGACATATTCAATCTATCAAACAATTTCTTTTATGGACCTGTGAATGGTTTGATGAACAAGTTTAAAATGATTGATTTGTCTGGTAATTATTTAGAAGGTCATGTGCAAGACGACAGCGGTGCTTTCAGTAATGTTAATCTGGCTAGAAATTGCCTACAGATAATTTCAAACCAGAGGGATTTGGAAGAGTGTAGACTGTTTTATGAACAGAAAAATTTACTCTTTCAAGAACCCAAGTCCAGGAAAAACAAACGATTGATATTCATACTGGCAGGTATATTTGGTGGCCTTGGCTTTATTGTGTTACTGGTTTTGGTCCTCATATTGGTTCTAAAACGATGTCATAAAAGTAAAGGTTTGGAAATTGAAAGAGGGACCACTAATGAGGGGCCTATTCCAGAAGGGGAAAGTTCTACACCTAAAGATCCTATCGTTGTAACTGCCGTGGGAGAAACATTTACTTTTGAACAAATCCTCCATTTAACTGGCAATTTTGATGAAGTAAACTTAATAAAGCATGGTCATTCTGGAGACTTTTTCTGGGGAGTGTTGGAAAATGGAACAACTGTGGTTGTCAAAAGGGTAGATTTAAGTTTATTTAAGAGAGAATCTTACATCGTAGAATTGGGATTATTAAGCAGAGTTTCACATGCAAGATTGGTCCCAATCCTGGGACAAAGCATGGATAATAAGAAAGATAAATGTGTAGTTTACAAGTATATGCCAAATGGAGATTTGGCTACTTCCTTGCACAGAGTGAGTGGTCCAGATGATAAATTGCAGTCCCTGGATTGGATCACAAGATCGAAAATTGCAATAGGAGCTGCTGAAGGACTAGCTTATCTACACAATTGCAGCCCACCCCTTGTTCACAGAGATATCCGAGCTAGTAGTATACTTCTTGATGATAAATTTGAAGTGCGACTTGGAAGTTTGAGTGAGGTTACTGCCCAAGGAGATGTTCATCAGAGTGTCATCTCAAGAGTTTTCAGCAAGCCAATATCTTCTAATCAAGGCAATTCTGGTAAATCAACTGTGACATGTGCCTATGATGTTTATTGTTTTGGGAAGATTCTAATCGAACTTGTGACCGGTAATATTGACATCAGTGAATCAGAAGATGCTACCACAAAAGATTGGTTAGACCAAACCTTGCGTTACATCAGCATATTCGATAAAGAACGGTTGAGTAAGATTGTTGACCCATCTTTGATAGTGGATGAGGATCTATTGGAAGAGGTATGGGTTATGGCAATTGTGGCCAAGTCATGCCTGAATCCTAAGCCTTCCAAACGTCCTCCAATGAAACATGTCCTCAAAGCACTTGAAAATCCACTGAAGATTCTCAGAGAAGAAAGTTTTAGCTCAGCAAAGTTGAGAACAACTTCATCTAATAGATCTTGGAGCACTGCATTCTTTGGTAGCTGGAGACATAGCTCATCAGACAGTGCTGCAACCACAATACATACAAATAAGGAAGGGTCTAGTGGCATTAAACAAGCAGGAAAAGTAGGGTCTCATGGTAGTGGTGGCAATGATCACTCATCTTCCAATAAAAGGTCATCCAATGAGATTTTCCCTGAACCATTGGAAATGCAAGACATGGAGAATGGAGAGACAAGATGA 2604 0.3929 MEMKMKRGITVSVVMVMLFLLVDLTMSLSLSSRTEWFALLELRSSMGIRGKEWPKKTDPCRNWTGVECRNGRVVGISVSGLKRTRFGRLNPDFEVDSLANFTLLKSFNASGFMLIGSIPEWFGEKLGALQVLDLRSCSISGEIPGSLGGLSSLKVLFLSGNNLTGRVPSNLGLLSSLFILDLSGNLLSGSVPDSFSKLGNLTSLDLSNNYLSGSIPPELGTLSNLQNLDLSNNAFTALVPSQLGNLSKLVELNLSMNSLSGSLPDSLFSSRLSALKVMILSRNSISGSLRDGLWSMPSLHFFDVSGNNLTGPLPKASGLNISSNNGDIFNLSNNFFYGPVNGLMNKFKMIDLSGNYLEGHVQDDSGAFSNVNLARNCLQIISNQRDLEECRLFYEQKNLLFQEPKSRKNKRLIFILAGIFGGLGFIVLLVLVLILVLKRCHKSKGLEIERGTTNEGPIPEGESSTPKDPIVVTAVGETFTFEQILHLTGNFDEVNLIKHGHSGDFFWGVLENGTTVVVKRVDLSLFKRESYIVELGLLSRVSHARLVPILGQSMDNKKDKCVVYKYMPNGDLATSLHRVSGPDDKLQSLDWITRSKIAIGAAEGLAYLHNCSPPLVHRDIRASSILLDDKFEVRLGSLSEVTAQGDVHQSVISRVFSKPISSNQGNSGKSTVTCAYDVYCFGKILIELVTGNIDISESEDATTKDWLDQTLRYISIFDKERLSKIVDPSLIVDEDLLEEVWVMAIVAKSCLNPKPSKRPPMKHVLKALENPLKILREESFSSAKLRTTSSNRSWSTAFFGSWRHSSSDSAATTIHTNKEGSSGIKQAGKVGSHGSGGNDHSSSNKRSSNEIFPEPLEMQDMENGETR 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03514 867 ProSiteProfiles Protein kinase domain profile. 491 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g03514 867 PRINTS Leucine-rich repeat signature 201 214 - -
Car04g03514 867 PRINTS Leucine-rich repeat signature 222 235 - -
Car04g03514 867 MobiDBLite consensus disorder prediction 810 867 - -
Car04g03514 867 SUPERFAMILY L domain-like 57 357 - -
Car04g03514 867 SMART LRR_typ_2 272 296 IPR003591 -
Car04g03514 867 SMART LRR_typ_2 174 197 IPR003591 -
Car04g03514 867 SMART LRR_typ_2 222 245 IPR003591 -
Car04g03514 867 SMART LRR_typ_2 198 220 IPR003591 -
Car04g03514 867 SMART LRR_typ_2 150 173 IPR003591 -
Car04g03514 867 SMART LRR_typ_2 126 149 IPR003591 -
Car04g03514 867 SMART LRR_typ_2 246 270 IPR003591 -
Car04g03514 867 Gene3D Ribonuclease Inhibitor 31 237 IPR032675 -
Car04g03514 867 Pfam Protein tyrosine and serine/threonine kinase 497 767 IPR001245 GO:0004672|GO:0006468
Car04g03514 867 PANTHER RECEPTOR-LIKE PROTEIN 55 287 822 - -
Car04g03514 867 PANTHER RECEPTOR-LIKE PROTEIN 55 10 269 - -
Car04g03514 867 MobiDBLite consensus disorder prediction 835 850 - -
Car04g03514 867 Gene3D Phosphorylase Kinase; domain 1 462 566 - -
Car04g03514 867 Gene3D Ribonuclease Inhibitor 238 416 IPR032675 -
Car04g03514 867 Gene3D Transferase(Phosphotransferase) domain 1 567 790 - -
Car04g03514 867 ProSiteProfiles Leucine-rich repeat profile. 200 222 IPR001611 GO:0005515
Car04g03514 867 SUPERFAMILY Protein kinase-like (PK-like) 470 768 IPR011009 -
Car04g03514 867 PANTHER RECEPTOR PROTEIN KINASE, PUTATIVE-RELATED 287 822 - -
Car04g03514 867 PANTHER RECEPTOR PROTEIN KINASE, PUTATIVE-RELATED 10 269 - -
Car04g03514 867 Pfam Leucine rich repeat N-terminal domain 38 68 IPR013210 -
Car04g03514 867 Pfam Leucine rich repeat 174 211 IPR001611 GO:0005515
Car04g03514 867 Pfam Leucine Rich Repeat 129 150 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03514 Car-Chr4 64328822 64333765 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Car04g03514 Pkinase 1.7e-19 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03514 04 64328822 64333765 Car04g03514 04 64328822 64333765 ECH