Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03481 ATGAGAAGGGAACAATCCCAGTCTCCTTGCCTAACAGATACGGAGCCCGATAGAATTAGTAGTTTACCAGGTCATGTAATAGACCAGATTCTTTCAAATTTGTCGGTTAGGGAAGCGGTGAGAACAAGTATTTTATCTACTAAATGGAGGTACAAATGGGCCACAATACCAAATCTCGTGTTTGATTCTCTATGTGTCTCTGAAACTTCCGAAGACCTTTTAGTTATCAAGAGCAAGCTATCGAGAATTATTGATCATGTACTTTTACTCCATTCTGGGCCAATCATAAAGTTCAAGCTCTCCCATCGTGAGCTCATTGGTGTCACTGATATTGATCGATGGACTCTTCATCTAACTAGAAGGCCTGTTAAAGAGTTTGTACTGGAAATCTGGAAAGGGCAACGCTATAAGATACCTTCATGCTTATTTTCTTGTCAAGGTTTACATCATTTAGAGTTATTTAACTGTTGGCTGAAACCACCATCAACATTTGGAGGTTTTAGGAACTTGAAGAGTCTTGATCTGCAACATGTTACATTGACTCAAGATGCTTTTGAAAACTTGATATCCAGTTGCCCCCTGCTTGAACGATTGACATTGATGAACTTTGATGGTTTCACCAGTCTTAACATCCATGCCCCAAATCTCCAGTTTTTTGACATTGGTGGTAAATTTGAAGATGTTAGCTTTGAGGACACTTCTCAATTAGCTGTGGTATCCATTGGGTTGTATTCGAATTTTGAAAGTAGTCAAAGTAGATTGCATGGACGTGCTAGCAATTTGGTCAATTTTTTTGTTCATTTACCTTGTATACAGAGGCTGGAGATTCAAAGCTATTTTTTGAAGTATTTGGCTGTGGGGATTGTGCCAGTAAAGCTTGCTACACCTTGCATTGATCTAAGTTATCTTTCTGTACGGATAAACTTCAATGATTTGAAGGAAATTTCAGCTGCGCTTTGCCTGTTCAGAAGCTCACCTGTTCTACGAGAACTAGAAATATTGGCACGGCCTGAGGAACAGACTATTCCGTTTATGCACGACGCCTATTGTTGGGAAGATGTCTATTTGGATTGGCCAGTCATGCGAGTGCAACATGTGAGGATAGAAGGCATCTCTGGTATCAAACCTGAATTAGACTTCATCAACTTTCTACTTCTATATTCTCCAGTGCTAGAAAGGATGACTGTGAAACCTGTTTCAAATGCTGGACCGGAGTTGGTGAAAGAACTATTGCGGTTCAGGAGAGCCTCGGGACGAGCTGAAGTTATTTACCTTGACTCTATTTAA 1287 0.4017 MRREQSQSPCLTDTEPDRISSLPGHVIDQILSNLSVREAVRTSILSTKWRYKWATIPNLVFDSLCVSETSEDLLVIKSKLSRIIDHVLLLHSGPIIKFKLSHRELIGVTDIDRWTLHLTRRPVKEFVLEIWKGQRYKIPSCLFSCQGLHHLELFNCWLKPPSTFGGFRNLKSLDLQHVTLTQDAFENLISSCPLLERLTLMNFDGFTSLNIHAPNLQFFDIGGKFEDVSFEDTSQLAVVSIGLYSNFESSQSRLHGRASNLVNFFVHLPCIQRLEIQSYFLKYLAVGIVPVKLATPCIDLSYLSVRINFNDLKEISAALCLFRSSPVLRELEILARPEEQTIPFMHDAYCWEDVYLDWPVMRVQHVRIEGISGIKPELDFINFLLLYSPVLERMTVKPVSNAGPELVKELLRFRRASGRAEVIYLDSI 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03481 428 PANTHER F-BOX/RNI/FBD-LIKE DOMAIN PROTEIN 13 394 - -
Car04g03481 428 SMART 9598neu4hmm 362 425 IPR006566 -
Car04g03481 428 Pfam Leucine Rich Repeat 169 193 IPR013101 -
Car04g03481 428 SUPERFAMILY F-box domain 16 67 IPR036047 GO:0005515
Car04g03481 428 Pfam F-box domain 19 52 IPR001810 GO:0005515
Car04g03481 428 SUPERFAMILY RNI-like 137 333 - -
Car04g03481 428 Gene3D Ribonuclease Inhibitor 103 349 IPR032675 -
Car04g03481 428 PANTHER F-BOX PROTEIN-LIKE 13 394 - -
Car04g03481 428 ProSiteProfiles F-box domain profile. 16 64 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03481 Car-Chr4 63929777 63932779 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03481 04 63929777 63932779 Car04g03481 04 63929777 63932779 ECH