Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03480 ATGGCAATTGACACTCCCCTACTAGATAACAACAATAACTCTCCTTCAAGTGTAGTTGATCATGAGAAGCCAGAGAAAATTGTTCACAAATTTGGGATTGAGTCGAAGAAGCTATGGAAATTAGCAGGTCCAACAATATTAACTGCCTTGTCTCAATTCTCAATTGGTGCACTCACTCTCACGTTTGTTGGCCATGTTGGTGAGCTTGATCTTGCTGCTGTTTCTGTTGAAAACTCAGTCATTGGTGGCTTTGCCTTTGGAGTCATGTTGGGTATGGGAAGTGCATTGGAGACACTATGTGGTCAAGCATTTGGTGCAGGTCATATAAGGATGTTGGGGGTTTACATGCAAAGATCATGGATCATCTTATTGACTACTGCCCTTTTATTGTTACCTTTTTATATTTGGGCATCTCCCCTCTTGAAGCTAACTGGACAGACTACTGAGATTGCAGATGCTGCTGGAAAATTTGCTTTGTGGATGATACCACAATTATTTGCATATGCTTTGAATTTTCCAATCCAAAAGTTCTTACAAGCACAAAGGAAAGTCCTTGTGATGTTATGGATATCATCAGGAGTATTGGTGGTACATGTAATTGTTAGTTGGCTTATAATATTGAAACTTGAATGGGGATTAGTTGGAGCTGCAGTTGCTCTCAACACATCATGGTGGTTGATTGTCATTGCTCAATTGTTGTACATTTTCATCACCAAATCAGATGGTGCTTGGAATGGATTCACATGGCTAGCATTTGCTGACTTATTTAGTTTTGTCAAACTTTCTTTAGCTTCAGCTGTTATGTTATGCTTGGAATTTTGGTACTTAATGATACTGGTGGTGATAGCAGGGCGTTTGGCTCACCCTCTAGTACCTTTGGATGCCATATCTATATGTATGAACATAAATGGTTGGGATTTAATGATCGCGCTCGGGTTTAACGCTGCAATAAGTGTGAGAGTATCAAATGAACTTGGAGCAGGTGATTTTAGGGCTGCAAAGTTCTCAGTGATAGTGGTTTCCATCACATCAATAGCCATAGGTGTTATTGCATTGATCGTAGTACTAACCACAAGAGATTACTTTCCTCAATTGTTTACTTCAAGTGATGCTGTTGCTAAGGAAACAACTAAACTTGCTGCCTTGCTTGGTGTCACTGTACTTCTAAACAGCCTTCAACCAGTCCTGTCTGGTGTTGCTATTGGAGCTGGTTGGCAATCTCTTGTGGCATACATCAATCTTGGGTGCTNNNNNNNNNNNNNNNNGCAGGAATATTGTTGGGATTCACATTTAATCTTGGAGCAGAGGGTATTTGGTCAGGTATGA 1326 0.3997 MAIDTPLLDNNNNSPSSVVDHEKPEKIVHKFGIESKKLWKLAGPTILTALSQFSIGALTLTFVGHVGELDLAAVSVENSVIGGFAFGVMLGMGSALETLCGQAFGAGHIRMLGVYMQRSWIILLTTALLLLPFYIWASPLLKLTGQTTEIADAAGKFALWMIPQLFAYALNFPIQKFLQAQRKVLVMLWISSGVLVVHVIVSWLIILKLEWGLVGAAVALNTSWWLIVIAQLLYIFITKSDGAWNGFTWLAFADLFSFVKLSLASAVMLCLEFWYLMILVVIAGRLAHPLVPLDAISICMNINGWDLMIALGFNAAISVRVSNELGAGDFRAAKFSVIVVSITSIAIGVIALIVVLTTRDYFPQLFTSSDAVAKETTKLAALLGVTVLLNSLQPVLSGVAIGAGWQSLVAYINLGCXXXXXXQEYCWDSHLILEQRVFGQV 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03480 441 PANTHER MULTIDRUG RESISTANCE PROTEIN 20 416 - -
Car04g03480 441 Pfam MatE 44 204 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Car04g03480 441 Pfam MatE 265 416 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Car04g03480 441 CDD MATE_eukaryotic 34 416 IPR045069 GO:0042910|GO:1990961
Car04g03480 441 PANTHER PROTEIN DETOXIFICATION 33 20 416 - -
Car04g03480 441 TIGRFAM matE: MATE efflux family protein 44 416 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03480 Car-Chr4 63923491 63927342 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03480 04 63923491 63927342 Car04g03480 04 63923491 63927342 ECH