Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03474 ATGATAGTGAGAGAAGAGACAAAAGGAGACATCATGTTCAGCGacaacaagaacaaaaacaatggcaacaaaaacaacaacaacaacaccaaTATTCCTCGTCCTCAGTTCATGCAATCAGAACCTAGACTTTCCACGACAGATGCTTTAACCGACACGATGCGTAGCAGCAGCGCCGCCTCCCCCATGAGCCCTTACAACTATGACTCCGGAAGGTTAAGTGGTGATAGCTCACCAATGATGATGTCACCATGGAATCAATCAAAAAGTTCTCCATTCTCGAAACCGCAATGGTCAGAATGCGAAGAAGCCGTTCCACAAAACTCAATAATCGGTTCTCTGGTTCGCGAAGAAGGTCACATATATTCATTAGCAGCTTCTGGCGACTTATTATACACCGGCTCCGACAGCAAGAATATTCGCGTTTGGAAGAATCTTCAAGAGTATTGCGGATTCAAATCCAACAGCGGATTGGTGAAAGCAATTATAATCTCCGGTCAAAAAATCTTCACCGGTCACCAAGACGGTAAAATTAGGGTTTGGAAAGTTTCAATCAAGAACCCTAGCGTTCACAAACGCGCTGGAACGTTACCAACGCTGAAAGACATTTTCAAAAGCTCGATTAAACCAAGCAATTACGTCGAAGTTCGTAAACACCGCACCGCGTTATGGATCAAACATTCCGACGCCGTTTCGTGTCTCAGTCTCTCACCTGATAAAAACTATCTCTACTCTGCTTCTTGGGATCGAACAATAAAGGTTTGGAGAATCGCCGATTCGAAATGTTTGGAATCGATTACCTCACACGAAGACGCGGTGAATTCCGTCGTTTGCGGAAACGACGGAGTGGTTTTCTCCGGTTCCGCTGACGGTACAGTGAAAGTGTGGCGAAGGGAGTCACGTGGGAAAGGAACTAAACACGTGCCGGTTAAAACGCTTTTAAAACAAGAATGTGCGGTTACGGCTTTAGCGGTGGAGCCCACAGGTTCAATGGTGTATTGTGGTGCGTCTGATGGGTTAGTTAATTTTTGGGAACGTGATAAGCAATTTGCGCACGGTGGGGTCCTCAAAGGTCATAAACTTGCTGTTTTGTGTTTATCTGCGGCAGGAACGTTGGTTTTCAGTGGCTCGGCTGATAAGACAATATGCGTGTGGAGAAGAGACGGTGTTATTCATACGTGTGTTTCTGTTTTAACGGGACATGACGGTCCTGTTAAATGTTTAGCGGTGGAACATGACCGTGAATCTGATGCTAGAGGTGAACAGCGGTGGATTTTGTATAGTGGAAGTTTGGATAAATCGGTTAAGGTTTGGAGTGTTTCTGAGAGTCTGCAGCATAATCGTATGACTTCTGATGTGGACTCGTTGCCTTCTGAATCCGATAGCAGTTATTCTTCGGGTCGGGCCGGTAACAAAAAGAGGAATTGA 1428 0.4412 MIVREETKGDIMFSDNKNKNNGNKNNNNNTNIPRPQFMQSEPRLSTTDALTDTMRSSSAASPMSPYNYDSGRLSGDSSPMMMSPWNQSKSSPFSKPQWSECEEAVPQNSIIGSLVREEGHIYSLAASGDLLYTGSDSKNIRVWKNLQEYCGFKSNSGLVKAIIISGQKIFTGHQDGKIRVWKVSIKNPSVHKRAGTLPTLKDIFKSSIKPSNYVEVRKHRTALWIKHSDAVSCLSLSPDKNYLYSASWDRTIKVWRIADSKCLESITSHEDAVNSVVCGNDGVVFSGSADGTVKVWRRESRGKGTKHVPVKTLLKQECAVTALAVEPTGSMVYCGASDGLVNFWERDKQFAHGGVLKGHKLAVLCLSAAGTLVFSGSADKTICVWRRDGVIHTCVSVLTGHDGPVKCLAVEHDRESDARGEQRWILYSGSLDKSVKVWSVSESLQHNRMTSDVDSLPSESDSSYSSGRAGNKKRN 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03474 475 Gene3D - 305 471 IPR015943 GO:0005515
Car04g03474 475 Gene3D - 211 304 IPR015943 GO:0005515
Car04g03474 475 MobiDBLite consensus disorder prediction 448 475 - -
Car04g03474 475 CDD WD40 118 439 - -
Car04g03474 475 MobiDBLite consensus disorder prediction 14 96 - -
Car04g03474 475 ProSiteProfiles Trp-Asp (WD) repeats profile. 224 265 IPR001680 GO:0005515
Car04g03474 475 PANTHER F-BOX AND WD40 DOMAIN PROTEIN 35 454 IPR045182 -
Car04g03474 475 PRINTS G protein beta WD-40 repeat signature 243 257 IPR020472 -
Car04g03474 475 PRINTS G protein beta WD-40 repeat signature 284 298 IPR020472 -
Car04g03474 475 PRINTS G protein beta WD-40 repeat signature 426 440 IPR020472 -
Car04g03474 475 SUPERFAMILY WD40 repeat-like 114 446 IPR036322 GO:0005515
Car04g03474 475 MobiDBLite consensus disorder prediction 448 469 - -
Car04g03474 475 ProSiteProfiles Trp-Asp (WD) repeats profile. 356 385 IPR001680 GO:0005515
Car04g03474 475 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 266 296 - -
Car04g03474 475 ProSiteProfiles Trp-Asp (WD) repeats profile. 313 345 IPR001680 GO:0005515
Car04g03474 475 PANTHER PROTEIN JINGUBANG 35 454 - -
Car04g03474 475 SMART WD40_4 391 439 IPR001680 GO:0005515
Car04g03474 475 SMART WD40_4 217 256 IPR001680 GO:0005515
Car04g03474 475 SMART WD40_4 145 182 IPR001680 GO:0005515
Car04g03474 475 SMART WD40_4 349 386 IPR001680 GO:0005515
Car04g03474 475 SMART WD40_4 306 345 IPR001680 GO:0005515
Car04g03474 475 SMART WD40_4 107 144 IPR001680 GO:0005515
Car04g03474 475 SMART WD40_4 259 297 IPR001680 GO:0005515
Car04g03474 475 MobiDBLite consensus disorder prediction 1 96 - -
Car04g03474 475 Gene3D - 98 202 IPR015943 GO:0005515
Car04g03474 475 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 224 257 - -
Car04g03474 475 Pfam WD domain, G-beta repeat 393 439 IPR001680 GO:0005515
Car04g03474 475 Pfam WD domain, G-beta repeat 316 344 IPR001680 GO:0005515
Car04g03474 475 Pfam WD domain, G-beta repeat 227 255 IPR001680 GO:0005515
Car04g03474 475 Pfam WD domain, G-beta repeat 118 144 IPR001680 GO:0005515
Car04g03474 475 Pfam WD domain, G-beta repeat 261 296 IPR001680 GO:0005515
Car04g03474 475 Pfam WD domain, G-beta repeat 354 385 IPR001680 GO:0005515
Car04g03474 475 ProSiteProfiles Trp-Asp (WD) repeats profile. 266 296 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03474 Car-Chr4 63790917 63793617 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03474 04 63790917 63793617 Car04g03474 04 63790917 63793617 ECH
Car05g02307 05 68258876 68262850 Car04g03474 04 63790917 63793617 PCT