Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03473 ATGCTAAGAGGCGAAATCGGAGTTTCGAGAAGCGCGAGGCACAACGCCACCGCTGTAACGGTTTCGAATAAGGTTCTTGTGGCCGTTAAAGCGGAGAAAGTGATCTCCAACACCGCATTAGCATGGGCGCTCACTCACATCGTTCATTCCAGCGACTCAATTACGCTTCTCGCCGTTTATTCCACCGAAAAAACCGGTACAAGATTCTGGAACTTTTCGAGATTCACCGGTGACTGTACGAATGGACGCGCGGGAAAGTTACCGGAGCAGATTTCTGATATCTCCGACTCTTGCTCTCAGATGGTGCTTCAGTTGCACAATCACATTGAGGTTAGGGTAAAGATTAAGGTTGTCACGGGAACTCCCAGTGGTGCTGTAGCAGCTGAAGCTAGATGGAGTGGTTCCCATTGGGTCATACTGGACAAGAAATTAAAGCAAGAGGTAAAACATTGCATGGATGAACTCAACTGTAGCATTGTGGTGATGAATGGCTCACAGCCTAAAGTCCTCAGACTTAATTTAGGACCCTCAAATGAACTCCAAACTCCATTTTTCTCTGCTTCCTCTTCACCAGGTATAGAAATTGGAAAACTAAAAGGCCGCAGATTGAAGCATTCCACCCCAGTCGGTAGCCCTGAAGAAGCAGGTTCGTCTGTTACAAGAGATATTGGACTAGATTCAATGTCAAGTTCAGACTCAATGGCTTCTCCTTTCCTGATCTATAAACAAAACCCTCTGTATGAGGGTCACGGACCACACAAAAGAACAAACAAACCAATCAGTGAGCCAAAAAATTTCAATGTCCAGCCACCACTGTACTTTAATTTGGAAAGGGATAACCGACCCCCTTCAAGGAAACTCCCAACATCATCTATGGCAAGTAATAACAACACTTTATTTTGCATCCCTGGGAAACACATTAATAATGAGAAGCTTCAAAGGGATGAAAACAGAATTATTCAAAGAGCTAAATCACCAAATTCTAAAACTTTACTTGAGAATTTTATACACTGTGATCAAATGGGAACAAATGACGTTGGGTTTAATAAATCTGAGAGTAGAAGTTATCTCACCAGGTCAGGCATCAGAGATAGCCCTATTCCTTTGGGAAGAAACTCCTCTATACCTCCTCCCTTGTGCTCACAGTGTCAGAATATAGCACCTGTATTTGGAAATCCTCCTAGACGGTTTTCATACAAAGAGATAGAAGAAGCTACTGACATGTTCTCAGATTTGAATTTTTTGGCTGAAGGTGGATTTGGTGTGGTTCACAAAGGAATACTCAAAGATGGCCAGGTTGTTGCAGTGAAACAATTAAAATTTAGTGGCTCTCAAGCAGATCTTGATTTTTGCAGGGAAGTTCGGGTTTTGAGCTGTGCACAACACAGAAATGTTGTATTGCTTATAGGATTTTGCACAGAGGGCAATGTGAGGATATTAGTCTATGAGTACATATGTAATGGATCCTTGGACCTCTGCTTACATGGCAACGAGAAAATACCTTTGGATTGGAACTCACGATTAAAGATAGCGATTGGAGTTGCCCGAGGCTTACGATACCTCCATGAAGATTGTAGAGTTGGTTGTATAGTGCACAGAGATCTTCGCCCCAAAAATATACTCTTAACACATGACTTTGAAACTCTGGTGGCTGATTTTGGGCTTGCTAGATGGCAATCAGAATGGAATATAAATACAGAAGATCGTGTGATGGGAACTTCAGGGTACATTGCACCGGAGTATCTTGATACTGGAATTCTTACGTATAAAGTAGATGTATATGCATTTGGAATTGTTTTATTAGAGTTAATAACCGGTAAAAGAATTAGTCAGTTAGAACAGTTCAATGGACACTCATATCTTTCTGAATGGTTTCACCCCCTACACATGTTGGACCCCAATCATATCTTTCAAAAGGTTGGATCTCTCAATCCATGTTTGGATTCTGAGTCGTCACTAGAATTTAATCTTCAATTCCAAGCTATGGCACAAGCTGCTTCATTCTGTCTGCGTTTGGATCCTGATTCCAGACCCCCAATGTCAAAGATTCTTAGAGTCCTTGAAGGGGGCAGTCCAGTTCGTCCTTTGGGTTTAGATATCAATTCAGTTGGTAACATAAGCGGTCATTTAAGTGGTTTGACTTTGCATACTCCTCCTAAAGGACATGGCCTGCATGTTAAAGGTGGAAAATTCTAA 2196 0.4194 MLRGEIGVSRSARHNATAVTVSNKVLVAVKAEKVISNTALAWALTHIVHSSDSITLLAVYSTEKTGTRFWNFSRFTGDCTNGRAGKLPEQISDISDSCSQMVLQLHNHIEVRVKIKVVTGTPSGAVAAEARWSGSHWVILDKKLKQEVKHCMDELNCSIVVMNGSQPKVLRLNLGPSNELQTPFFSASSSPGIEIGKLKGRRLKHSTPVGSPEEAGSSVTRDIGLDSMSSSDSMASPFLIYKQNPLYEGHGPHKRTNKPISEPKNFNVQPPLYFNLERDNRPPSRKLPTSSMASNNNTLFCIPGKHINNEKLQRDENRIIQRAKSPNSKTLLENFIHCDQMGTNDVGFNKSESRSYLTRSGIRDSPIPLGRNSSIPPPLCSQCQNIAPVFGNPPRRFSYKEIEEATDMFSDLNFLAEGGFGVVHKGILKDGQVVAVKQLKFSGSQADLDFCREVRVLSCAQHRNVVLLIGFCTEGNVRILVYEYICNGSLDLCLHGNEKIPLDWNSRLKIAIGVARGLRYLHEDCRVGCIVHRDLRPKNILLTHDFETLVADFGLARWQSEWNINTEDRVMGTSGYIAPEYLDTGILTYKVDVYAFGIVLLELITGKRISQLEQFNGHSYLSEWFHPLHMLDPNHIFQKVGSLNPCLDSESSLEFNLQFQAMAQAASFCLRLDPDSRPPMSKILRVLEGGSPVRPLGLDINSVGNISGHLSGLTLHTPPKGHGLHVKGGKF 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03473 731 PANTHER OS01G0253100 PROTEIN 19 721 IPR045271 GO:0004714|GO:0006468
Car04g03473 731 Gene3D Transferase(Phosphotransferase) domain 1 485 692 - -
Car04g03473 731 Pfam Protein tyrosine and serine/threonine kinase 415 628 IPR001245 GO:0004672|GO:0006468
Car04g03473 731 SMART tyrkin_6 409 687 IPR020635 GO:0004713|GO:0006468
Car04g03473 731 SUPERFAMILY Protein kinase-like (PK-like) 387 688 IPR011009 -
Car04g03473 731 ProSitePatterns Tyrosine protein kinases specific active-site signature. 530 542 IPR008266 GO:0004672|GO:0006468
Car04g03473 731 MobiDBLite consensus disorder prediction 202 222 - -
Car04g03473 731 ProSiteProfiles Protein kinase domain profile. 409 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g03473 731 Gene3D Phosphorylase Kinase; domain 1 383 484 - -
Car04g03473 731 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 19 721 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03473 Car-Chr4 63784172 63790637 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Car04g03473 PK_Tyr_Ser-Thr 3e-42 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03473 04 63784172 63790637 Car04g03473 04 63784172 63790637 ECH