Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03455 ATGGAGGGAGTCACAAAGTTATCCGTTGAACAAATTCAGCCCCCCACTTATGGTAACTTAGTGACCATTCTTAGCATTGATGGAGGTGGTATTAGGGGCCTCATCCCTGCCACAATTATTGAATTTCTTGAATCTCAGCTTCAGGAGTTGGATGGTGAAGATGCAAGACTTGCAGATTACTTTGATGTGATATCAGGAACAAGTACAGGAGGTCTTGTAACTGCCATGATAGCTGCTCCTGATAAAAATAACCGTCCACTTTTTGCTGCCAAAGATATTAAACCCTTTTACCTTGAACATTGCCCAAAAATTTTCCCACAACATAGAGGGCTAGGTGGGATAATGTTAGCAAAGGTAGTGAGATCACTTGGAGGACCAAAATATGATGGAAAATATCTTCATGATGTTATAAGAGAGAAACTTGGAGACATTCGGTTGCATGAGACCATCACCAACATTGTTATTCCCACATTCGACATCAAGTCTTTGCAGCCAATTATTTTCTCATCTTATCAGCTTGAGAAATCACCTTGTTTGGATGCTAAACTCTCTGACATATGTATTAGTACATCTGCTGCACCTACTTATCTACCTGCTTACAATTTCACCAATAAAGATCCAAACAATCATGAAGAGGAATTCAATCTCATTGATGGTGGTGTTTGTGCAAATAATCCGGCTTTAGTTGCTATGAATGAAGTAACAAAGCAGATAATAAATCAAAGTCCAGATTTCTTTCCAATAAAGCCCCTGGAATATGGTCGATTTCTGATTATTTCATTAGGAACTGGAACAGCAAAAAATGAGGAAAAATTTAGTGCAGATATAGCAGCAAAATGGGGGTTATTAGGTTGGCTAACAAATAGTGGTTCTAATCCTTTAATCGATGTTTTTACTCAATCAAGTGGTGATATGGTTGATTTTCATTTATCTTGTGTCACTCAAGCTCTTCATTCACAGGATAATTACCTTCGAATTCAGGATGACACATTGACCGGAGATGTTTCTTCCGTTGACATTGCTACGGAAGAGAATTTGGAGAAACTGTGTGAAATTGGCGATAAGTTATTGAAGAAACCTGTTTCTAGGGTTAATTTAGAAAATGGTCACTTTGAACCTGTGATCGATGGAGAAACCAATGAACAAGCTCTTAAAAGGCTTGCAAAAACACTTTCACAAGAGAGAAGACTTCGTGACATGAGtGTTCCTCCTCCATTGGAATTTGGAAGCAATACTCCAATACAAGCCACAAGGGATGGTGAATACTCCGAGAGATGGAATTGGATATGGATACCTCGTGGCTTTACTTTCATGTTTTTCATACTCTATCTACTAGTGTAA 1341 0.3848 MEGVTKLSVEQIQPPTYGNLVTILSIDGGGIRGLIPATIIEFLESQLQELDGEDARLADYFDVISGTSTGGLVTAMIAAPDKNNRPLFAAKDIKPFYLEHCPKIFPQHRGLGGIMLAKVVRSLGGPKYDGKYLHDVIREKLGDIRLHETITNIVIPTFDIKSLQPIIFSSYQLEKSPCLDAKLSDICISTSAAPTYLPAYNFTNKDPNNHEEEFNLIDGGVCANNPALVAMNEVTKQIINQSPDFFPIKPLEYGRFLIISLGTGTAKNEEKFSADIAAKWGLLGWLTNSGSNPLIDVFTQSSGDMVDFHLSCVTQALHSQDNYLRIQDDTLTGDVSSVDIATEENLEKLCEIGDKLLKKPVSRVNLENGHFEPVIDGETNEQALKRLAKTLSQERRLRDMSVPPPLEFGSNTPIQATRDGEYSERWNWIWIPRGFTFMFFILYLLV 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03455 446 Pfam Patatin-like phospholipase 24 231 IPR002641 GO:0006629
Car04g03455 446 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 24 231 IPR002641 GO:0006629
Car04g03455 446 PANTHER PATATIN 1 403 - -
Car04g03455 446 CDD Pat17_isozyme_like 18 369 - -
Car04g03455 446 SUPERFAMILY FabD/lysophospholipase-like 19 368 IPR016035 -
Car04g03455 446 PANTHER XYLOSE ISOMERASE 1 403 - -
Car04g03455 446 Gene3D Cytosolic phospholipase A2 catalytic domain 10 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03455 Car-Chr4 63199813 63203379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03455 12 403 Miscellaneous Gene Families AT2G26560 65.903 0.0 521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03455 04 63199813 63203379 Car04g03455 04 63199813 63203379 ECH