Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03449 ATGTCTACTAAGAGTGAACACCAAACGGTTCCTCTTTCGGTTCTATTGAAACGTGAATTGATGATTGAGAAAATTGAGAAACCTGAGATTGTTCATGGTCAAGCTGGTCAAAGCAAGAAAGGAGAGGATTTCACCTTGTTAAAGGCCGAGTGTCAGAGGATGATGGGTGATGGAGTCTATACTTATTCAGTTTATGGGCTATTTGATGGGCACAATGGATCTGCTGCTGCTATTTATTCTAAGGAGAATCTTCTAAATAACGTGTTAAGTGCAATTCCTCCAGATCTTAACAGAGATGAGTGGTTAGCAGCGTTGCCTAGAGCTTTGGTTGCAGGCTTTGTAAAAACTGATAAAGATTTTCAACAGAAAGGACAAAAATCAGGAACAACTGTCACCTTTGTCATTATCGAAGGATGGGTTGTAACAGTTGCATCAGTTGGCGATTCCCGCTGTGTACTAGAATCTTCTGAAGGCGAGATTTATTATTTGTCAGCAGATCATCGGCTAGAAACAAATGAAGAGGAGAGGGTTCGTATCACCTCTAGTGGGGGTGAGGTTGGTCGTTTAAATACAGGAGGAGGTGCAGAGGTTGGTCCATTGAGATGTTGGCCTGGTGGCCTGTGCCTTTCACGATCTATTGGAGATATGGATATTGGTGAATTTGTTGTCCCTGTACCTTATGTAAAACAAGTGAAGCTGTCCACTGCTGGAGGCCGGCTTGTTATCTGCAGTGATGGTGTTTGGGACTCTTTACCTGCAGAAGTGGCCCTTGATTGTTGCCGTGGCATGTCACCAGAGTCTGCTGCACCGCAGATTGTAAAAGAAGCTTTACAAGCAAAGGGACTTAGGGATGATACAACCTGTATCGTTGTTGATATATTACCTCAGGAGAAGCCACCTGCTCCTGTGCCACATCAAAAGAAGCCAGTAAAAGGAATGCTCAAGGCAATGTTTCGTAAAAAGTCTTCTGAATCATCTTCTTATATTGATAAAGAATACTTGGAGCCAGATGTAGTAGTGGAGCTGTATGAGGAAGGCTCTGCTATGCTTTCAGAGAGGTTAGATACAAAATATCCACTCTGCAACATGTTCAAGTTGTTCATATGTGCAGTATGTCAAGTAGAAATAAAACCCGGAGAGGGTATTTCAGTACATGAGGGTGCTCCCAACCCTCGAAAATTGCGCCCCTGGGATGGACCTTTCCTTTGCTCTAGTTGCCAGGAGAAGAAAGAAGCCATGGAAGGGAAAAGATCATTAGATAGACTTAGCAGCGGAAGTGACGAATGA 1287 0.4343 MSTKSEHQTVPLSVLLKRELMIEKIEKPEIVHGQAGQSKKGEDFTLLKAECQRMMGDGVYTYSVYGLFDGHNGSAAAIYSKENLLNNVLSAIPPDLNRDEWLAALPRALVAGFVKTDKDFQQKGQKSGTTVTFVIIEGWVVTVASVGDSRCVLESSEGEIYYLSADHRLETNEEERVRITSSGGEVGRLNTGGGAEVGPLRCWPGGLCLSRSIGDMDIGEFVVPVPYVKQVKLSTAGGRLVICSDGVWDSLPAEVALDCCRGMSPESAAPQIVKEALQAKGLRDDTTCIVVDILPQEKPPAPVPHQKKPVKGMLKAMFRKKSSESSSYIDKEYLEPDVVVELYEEGSAMLSERLDTKYPLCNMFKLFICAVCQVEIKPGEGISVHEGAPNPRKLRPWDGPFLCSSCQEKKEAMEGKRSLDRLSSGSDE 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03449 428 SMART PP2C_SIG_2 46 293 IPR001932 -
Car04g03449 428 PANTHER ALPHABET, ISOFORM E-RELATED 2 422 - -
Car04g03449 428 CDD PP2Cc 36 293 IPR001932 -
Car04g03449 428 Pfam Protein phosphatase 2C 42 278 IPR001932 -
Car04g03449 428 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 2 422 - -
Car04g03449 428 SMART PP2C_4 21 291 IPR001932 -
Car04g03449 428 Gene3D - 31 299 IPR036457 -
Car04g03449 428 SUPERFAMILY PP2C-like 31 293 IPR036457 -
Car04g03449 428 ProSiteProfiles PPM-type phosphatase domain profile. 41 293 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03449 Car-Chr4 63162217 63166840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03449 1 427 PP2C-type Phosphatase Gene Family AT1G47380 78.738 0.0 712
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03449 04 63162217 63166840 Car04g03449 04 63162217 63166840 ECH
Car04g03449 04 63162217 63166840 Car05g02739 05 72473906 72477411 PCT