Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03447 ATGCAAGCTGTGGGGAGGTTAGGAGGTTACATAAGACGTGGTGTGTGCAGTGTTTCTGGTCCTTTTCTTCCATTCGGCGGCGCCGTCGACATTATTGTTGTTCAACAGAAAGATGGTAGCTTCAAATCATCTCCTTGGTATGTTAGATTTGGGAAATTCCAGAGGGTTTTGAAAGCAGCTGAAAGGGAAAAGGTTGAGGTTAATATTAGTGTTAATGGAATTGAAACTGATTTCTACATGTGTTTGAATCCTAAAGGGGAAGGTTtctttctccatgctaatacacaagaagaagaagaagatgaACGAGAAATGgaagaacgagaagaagaagaggatgagagagaaACAATGTTGTATTATGATGATATCCAATTGAGAGGTAATAAAAGGCAATTCAAGTCGAAAAGTTGTAACTTTGATTCAGAAAGGTTGAGTTCGGAGGCTCGGGTTGTGGATAGGATTGGTTCTCGCCGTTCGAGAATACTTAAGCTTGTACTTGGGCCAAAGTCTGGTGATGATGCAGATACTGATATAGATTTAGTGGAGCGTGCGGAGATTGCAGCCAAGTTGTTGGAGTTAAAGTGGGAAAGAAAGAAAACTCGGGGTGATAATTTGGACAAGGAGAAAGGTTGTTCTTGCAATGAGCAAAATGGCATTAGTTCCAAGTCTGAATCTGGTGAGGTTGCTTGCCTTGCAAGTGAAGCATGTGGAGAAGTCAATGTTCTTGGTGAGATTTTCGACTCTACAACTATGCAGTTACCTGAGGGTGTAAAAACTGAGGGAGTGACTAAGAATGTCGATCTTGGGGTGCCAGTAACAGATTCTAATATTTGTGATGTGCCGGATGTTGGAAGCATTGCAAAGTTTCGAAAATCTCGAACTGTCAATATTGGTCGTAGGGATCGTTCTGTTAAGAAGGTTAGAGCAAATACACCAACGTCTGAGCAATTGGCATCCTTGAATCTGAGGGATGGGAGTAACACAGTAACCTTCTGTTTCTCTACACCTATGATGGGGAGGCGGCAGGTTGACGCTCGCATATATTTGTGGAAATGGAATACTCGTATAGTGATATCAGATGTGGATGGGACAATTACAAGGTCAGATGTTCTAGGTCAGTTCATGCCTTTAGTAGGGATTGATTGGTCCCAGTCAGGTGTTGCTCATTTATTTTCACATATCAAGGAAAATGGCTACCAGCTAATTTTTCTTAGTGCTCGTGCAATTTCTCAGGCACATCACACTAGACAATTCCTATTCAACCTTAACCAGGATGGGAAAGTCTTACCGGATGGTCCTGTTGTTATTTCCCCCGACGGACTTTTTCCTTCCCTATATCGAGAAGTTATCCGGAGAGCTCCTCACGAGTTCAAAATTGCATGTTTAGAGGATATCAGGGCTCTTTTTCCTCCTGATTACAATCCGTTCTATGCTGGTTTTGGAAATAGAGATACTGATGAAATCAGCTACCTTAAGGTTGGAATCCCAAAAGGAAAAATAGTCATTATTAATCCCAGGGGTGAGATTTCTGTAAACCGACGTTGTTTAGAAACAAAATCATATACTTCTCTTCATGCTCTCGTGAATGGAATGTTCCCTCCTACAGACTCATCTGAGCAGAACTACATAGGTGATGTGTCGCTAAGCCCCAGACAAGAGCATAGTTCTGTTGTTAACTTGTGCTGGTGGGTTGATTCATTGGCAATTTGA 1713 0.4028 MQAVGRLGGYIRRGVCSVSGPFLPFGGAVDIIVVQQKDGSFKSSPWYVRFGKFQRVLKAAEREKVEVNISVNGIETDFYMCLNPKGEGFFLHANTQEEEEDEREMEEREEEEDERETMLYYDDIQLRGNKRQFKSKSCNFDSERLSSEARVVDRIGSRRSRILKLVLGPKSGDDADTDIDLVERAEIAAKLLELKWERKKTRGDNLDKEKGCSCNEQNGISSKSESGEVACLASEACGEVNVLGEIFDSTTMQLPEGVKTEGVTKNVDLGVPVTDSNICDVPDVGSIAKFRKSRTVNIGRRDRSVKKVRANTPTSEQLASLNLRDGSNTVTFCFSTPMMGRRQVDARIYLWKWNTRIVISDVDGTITRSDVLGQFMPLVGIDWSQSGVAHLFSHIKENGYQLIFLSARAISQAHHTRQFLFNLNQDGKVLPDGPVVISPDGLFPSLYREVIRRAPHEFKIACLEDIRALFPPDYNPFYAGFGNRDTDEISYLKVGIPKGKIVIINPRGEISVNRRCLETKSYTSLHALVNGMFPPTDSSEQNYIGDVSLSPRQEHSSVVNLCWWVDSLAI 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03447 570 Pfam LNS2 (Lipin/Ned1/Smp2) 312 534 IPR013209 -
Car04g03447 570 PANTHER GH19076P 293 542 - -
Car04g03447 570 Coils Coil 91 116 - -
Car04g03447 570 PANTHER LIPIN 1 225 IPR026058 -
Car04g03447 570 SUPERFAMILY HAD-like 349 497 IPR036412 -
Car04g03447 570 PANTHER GH19076P 1 225 - -
Car04g03447 570 Pfam lipin, N-terminal conserved region 17 103 IPR007651 -
Car04g03447 570 PANTHER LIPIN 293 542 IPR026058 -
Car04g03447 570 SMART lns2 357 513 IPR031315 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03447 Car-Chr4 63143405 63150176 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03447 04 63143405 63150176 Car04g03447 04 63143405 63150176 ECH
Car04g03447 04 63143405 63150176 Car05g02741 05 72494903 72502990 PCT