Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03443 ATGCTCCTTGAGAGAATGTCATCACAAGGTAAGGAAGAAAAAAGCATAAAAATGAAAGCAATATTGGAAGAATTGCCCCAATCAAAATTAAGGAAGCCAAAGAAAAATGGGACAAAGATAGAAGTACCAAGTTTTTTAAATGAAAAAATTGGTAAAGGAATGAAAATTGGAATGATAAACATGAATGAAGATGATGATGTAAGTGAATGGAACACACATGGAGAAACAATACCAATTTATTTCGATAAAGTATCAAAAAATTTCAATTGGACAGATTTATTTCCAGAATGGATAGATGAAGAAGAAGAGAGTGATGTACCAACATGTCCTGAAATACCAATGCCAAATTTTGAATCATATGAAAACATGGATTTAATAGTAGCAAAGTTACCATGCAAGTATCCAGAAGAAGGGTGGGGAAGGGAAGTTTTGAGGTTACAAGTTAATCTTATTGTGGCAAATATGGTTGTGAAGAAAGGGAAAAAAGATTGGAATTTGAAGACAAAAATTGTGTTTTGGAGTAAGTGTAGACCAATGTTGGAATTGTTTAGATGCAATGATTTGGTTAAGAATGAAGGTGATTGGTGGTTTTATGAGTCTGATGTAAACAGGTTGGAACAAAAGGTTTCTTTGCCTGTTGGCTCATGTACTTTGTCTTTGCCTCTATGGGAACAAGGGATCGACGAAGTGTACGACACGTCGAAAATGGAACGAAACGTAAGAAGTGAAAGAAGAGCGAAACGCGAAGCCTATGCAACAGTACTACACTCTTCAGAAAGTTACGTTTGCGGGGCAATAATGTTGGCACAGAGCCTCCAAAAAACAGGAACCAAACGCGACCTAATAATCCTGATTGACAAATCCATCTCGGTTCGTAAACGCCACGCGCTATCTGCAGCGGGTTGGAAGATCCGaaccataacccgaatccgaaacccgaaagcagaaaATGGAACATATAATGAGTATAATTACAGCAAGTTTCGTTTGTGGCAACTAACTGATTACGACAAAATCATATTCATAGATTCTGACATCGTTGTACTCCGAAATCTCGATATCCTGTTCAATTTCCCTCAAATGTCTGCTACTGGAAATGATCAATCAATTTTCAACTCTGGCATCATGGTTATCGAGCCCTCCAATTGCACCTTCAGTGTACTCATGAGTAGGCGAGACGACGTCGTTTCATACAATGGAGGAGACCAAGGATTTCTAAACGAGATATTCGTGTGGTGGCATAGACTTCCAAGGAGAATAAACTATTTGAAAAATTTCTGGGCCAACACAACTGTTGAAGCAAGCGTTAAAAATGGTTTATTTGGTGCAGACCCTCCTAAACTTTATTCAATTCATTACCTTGGTTTAAAACCTTGGAATTGTTATAGGGACTATGATTGTAATTGGGATGTAGTGGATCAAAGGGTTTATGCTAGTGACGTGGCACACCGACGTTGGTGGAACATTCATGATGAAATGGATACCAAGTTGCAAAGTTTTTGTAGGTTGACCAGACAACGTAGGACTGAGTTGAATTGGGAAAGGAGGAGATCCAGTAAGATGGGTTCACTTGATTATCATTGGAAGATTAATATTACTGATCCTAGAAAATCTGGTTCACTTTTGATGGATTAG 1635 0.3719 MLLERMSSQGKEEKSIKMKAILEELPQSKLRKPKKNGTKIEVPSFLNEKIGKGMKIGMINMNEDDDVSEWNTHGETIPIYFDKVSKNFNWTDLFPEWIDEEEESDVPTCPEIPMPNFESYENMDLIVAKLPCKYPEEGWGREVLRLQVNLIVANMVVKKGKKDWNLKTKIVFWSKCRPMLELFRCNDLVKNEGDWWFYESDVNRLEQKVSLPVGSCTLSLPLWEQGIDEVYDTSKMERNVRSERRAKREAYATVLHSSESYVCGAIMLAQSLQKTGTKRDLIILIDKSISVRKRHALSAAGWKIRTITRIRNPKAENGTYNEYNYSKFRLWQLTDYDKIIFIDSDIVVLRNLDILFNFPQMSATGNDQSIFNSGIMVIEPSNCTFSVLMSRRDDVVSYNGGDQGFLNEIFVWWHRLPRRINYLKNFWANTTVEASVKNGLFGADPPKLYSIHYLGLKPWNCYRDYDCNWDVVDQRVYASDVAHRRWWNIHDEMDTKLQSFCRLTRQRRTELNWERRRSSKMGSLDYHWKINITDPRKSGSLLMD 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03443 544 SUPERFAMILY Nucleotide-diphospho-sugar transferases 249 498 IPR029044 -
Car04g03443 544 CDD GT8_Glycogenin 249 493 - -
Car04g03443 544 Pfam Glycosyl transferase family 8 254 358 IPR002495 GO:0016757
Car04g03443 544 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 247 497 IPR029044 -
Car04g03443 544 PANTHER UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 2 15 537 IPR030519 GO:0005794|GO:0009834|GO:0015020|GO:0045492
Car04g03443 544 PANTHER GLYCOGENIN SUBFAMILY MEMBER 15 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03443 Car-Chr4 63113670 63117038 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03443 36 543 Glycosyltransferase AT4G33330 68.164 0.0 750
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03443 04 63113670 63117038 Car04g03443 04 63113670 63117038 ECH