Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03422 ATGAAGGTGCATCAGTTCACACGTGGATTTTGGGAGCATGAACCTTCCCTTACACTTGGGTGCAAGCGTTTACGCCCTCTTGCTCCTAAAATTTCTAATAACACCGATCATTCTACTACTAACACCCCCTCTCTTTCTTTTGATCTCAAGAGTTTCATTAGACCCGAAAGTGCTTCCAGAATTAATCTTGCTTCTTCCGATGATAACAAGAAAGATCCACCTTCACCACAAGGCCAGGTTGAGACGCTTCCAGGAGGGACAAGATGGAATCCAACACAAGAACAAATAGGAATATTAGAGATGTTATACAGAGGAGGGATGAGAACTCCAAATGCACAACAAATAGAACAAATCACAATTCAACTTGGCAAGTACGGAAAGATTGAAGGGAAAAATGTGTTCTATTGGTTCCAAAACCACAAAGCACGCGAGAGACAAAAGCAGAAAAGAAATAGTCTTGGCCTTGTTCATAGTCCTCGAACTCCCACCACAACACTTGTGTCACCCACCTTTAGTTGCATTACAACTTTGGACACCCCCAAAAGGGGTGAAGTAATGGAAAGAGATCAAGGAGATCATAGTCCATTGAAAAAGAGTAGGAGTTGGCCATTGGAGTACATAGAAGAGCAAAATTGGTCAATGTGCAAAGAAGAGGAACATAAAACTCTAGAGCTTTTCCCATTACATCCGGAAGGCAGATGA 702 0.4217 MKVHQFTRGFWEHEPSLTLGCKRLRPLAPKISNNTDHSTTNTPSLSFDLKSFIRPESASRINLASSDDNKKDPPSPQGQVETLPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITIQLGKYGKIEGKNVFYWFQNHKARERQKQKRNSLGLVHSPRTPTTTLVSPTFSCITTLDTPKRGEVMERDQGDHSPLKKSRSWPLEYIEEQNWSMCKEEEHKTLELFPLHPEGR 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03422 233 PANTHER WUSCHEL-RELATED HOMEOBOX 4 1 233 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Car04g03422 233 CDD homeodomain 87 148 IPR001356 GO:0003677
Car04g03422 233 Gene3D - 87 152 - -
Car04g03422 233 SUPERFAMILY Homeodomain-like 85 153 IPR009057 -
Car04g03422 233 Pfam Homeodomain 87 146 IPR001356 GO:0003677
Car04g03422 233 ProSiteProfiles 'Homeobox' domain profile. 92 147 IPR001356 GO:0003677
Car04g03422 233 MobiDBLite consensus disorder prediction 63 91 - -
Car04g03422 233 SMART HOX_1 84 151 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03422 Car-Chr4 62916737 62918405 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03422 1 167 Wox Gene Family AT1G46480 61.364 4.52e-65 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Car04g03422 Homeodomain 3.7e-18 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03422 04 62916737 62918405 Car04g03422 04 62916737 62918405 ECH