Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03416 ATGGAAACAGAGGAAGATTGTTGTGTCAAAGTTGCGGTTCATGTTCGTCCGTTAATCAACGATGAGAAGCTTCAAGGTTGTAAAGATTGTGTAACCGTTGTTTCAGGGAAGCCTCAGGTACAAATTGGTGCCCATTCCTTTACATTTGATCATGTTTATGGGAGCACTGGTTCTCCCTCATCTGCCATGTTTGATGAATGTGTCGCTTCCCTTGTTGATGGTTTGTTCCAAGGATATAATGCCACTGTTCTTGCATATGGTCAGACAGGTTCTGGGAAAACATACACCATGGGCACTGGCTCTAAAGATAGTTACCAGACTGGAATAGTACCCCAAGTTATGAGTGCCTTGTTTAGTAAAATTGAGACCTTAAAGCATCAGATTGAATTTCAGCTGCATGTTTCCTTTATCGAGATTCTTAAAGAAGAAGTAAAAGACTTGTTGGACCTATCCTCTATGAACAAACCAGATACTGCAAATGGACATGCAGGGAAAGTGACTATTCCTGGTAAACCACCAATACAAATTCGTGAGGCTTCAAATGGCGTCATTACCTTAGCAGGATCTACTGAAGTCAGTGTTGCAACACTGAAAGAAATGTCTGCTTGCCTAGAACAAGGATCATTGAGTAGAGCAACTGGAAGCACTAATATGAACAACCAATCCAGTCGTTCACATGCTATCTTCACCATCACACTAGAGCAGATGCGGAAGCTCAATAGTCCTAGTGAGATCAGTTTAAATGATACCATGAATGAAGAGTATCTTTGTGCCAAGTTGCACTTAGTAGATCTTGCTGGATCAGAACGAGCTAAAAGAACGGGGTCTGATGGTTTGCGATTTAAGGAAGGAGTTCACATTAACAAAGGCTTACTAGCACTTGGCAATGTGATTAGTGCACTCGGTGATGATAAAAAGAGAAAAGAAGGTGTTCATGTTCCTTATAGGGATAGTAAACTTACTAGGCTTTTGCAGGATTCACTTGGTGGCAACAGCAGAACTGTTATGATAGCCTGCATAAGTCCTGCTGATATTAATGCCGAGGAAACCCTTAACACTTTGAAGTACGCAAATCGGGCACGCAATATCCAAAATAAACCTGTTGTCAATAGAGATCCGATGTCAAGTGAGATGCTTAAAATGCGACAACAGCTAGAGAATTTGCAAGCAGAACTTTGTGCTCGTTCTGTTCAGGTCCTCAAGGAAAGAATTTCTTGGCTTGAAGCAGCTAATGAGGATCTTTGCCGTGAGCTTCATGAACATCGTAGTAGATTCTCTGTTGGTGAAAAGGATGCTTATGATGGTAGCATGTGCAATGTAAAGACTGATGGGCTTAAAAGGGGCTTACCTATCACAACCTCTGATTATCCAATGAGCGAATCAACGGCAGGGGATTCAAGGGAAATTGAAGAAGTAGCAAAAGAGTGGGAGCATACACTTCTGCAAAATAGTATGGATAGAGAATTACATGAATTGAATAAACGCTTGGAGCAGAAAGAGTCTGAGATGAAGCTTTTTGGAGTATCGGATGCTGAAACACTCAAGCAGCACTTTGGAAGGAAGATAATGGAACTTGAGGATGAGAAGAGAACTGTCCAGCAAGATCGGGATCGTCTTTTGGCTGAAGTTGAAAATCTTGCTGCTGGTTCTGATGGACAGACACAGAAATCAGAGGATATACATGCTCAAAAATTAAAAGCACTTGAAGCCCAGattctggatctgaagaagaaacaggagagccaggttcagcttctaaagcaaaagcaaaaaagtgatgaagcagcaaagcgcctgcaagatgaaatacactctataaaagctcaaaaggttcaattgcaacaaaggataaaacaagaggcagaacagtTTCGGCAGTGGAAGGCCACTAGAGAGAAAGAGCTGCTGCAATTACGGAAAGAAGGAAGAAGAAATGAGTTTGAAAGGCATAAGCTGCAAGCTCTAAATCAGCGCCAGAAAATGGTCCTTCAGAGAAAAACTGAGGAAGCTGCAATGGCCACCAAGAAGTTAAAGGAATTGTTAGAAGCTCGTAAATCTTCCAGCCGAGACACGTCAGGTATTTACAATGAGAAGTCCTTGCAACGGTGGCTTGATCATGAGCTAGAAGTCATGGTAAAAGAGCATGAAGTTCGTTTTGAGTATGAGAAGCAGAGCCAAGTGCGGGCTGCTCTTGCAGAGGAATTAGCCATGCTGAAACAAGTAAATGAATTTGCTGCCAGTGGTCTCAGTCCTCCAAGAGGGAAGAACGGATTTGCTAGAGCATTCTCTATGTCACTAAATGCAAGAATGGCCAGAATAGCTTCTCTGGAGAACATGCTAAGCATATCGTCTAATTCACTTGTGGCAATGGCTTCTCAACTATCTGAGGCAGAAGAACGAGAACGAGCCTTCGCTAACCGTGGACACTGGAACCAGTTGCGCTCAATGGGAGAAGCCAAAAATTTGCTTCAATATATGTTCAATTCTCTTGCAGACACTAGGTGTCAGCTGTGGGAGAGGGACATGGAGATAAGAGAAATGAAGGATCAAATCAGAGAACTTGTAGGTCTATTAAGGCAAAGTGAGATCAAGAGAAAGGAAGTTGAGAAGGAACTGAAAGTAAGAGAGCAAGATGTTGCAACCCCATTGGCCAAGCCAGCTTCAGGAAACTCTCCGAATTCATTGAAACACTGTGCTGAAGACATCAAGGAACCTTTATCTCCTGAGTCTGTGCCAGCACAGAAACAGCTTAAATATACACCAGGCATTACTAATGGCCAAGTGAGGGAATCAGCAGCATTTATAGATCAAAGTAGAAGGATGGTACCCATTGCACAACTGTCCATGAAAAAACTAGCAATTGCTGGACACGCATCTGGCAAGCTGTGGAGGTGGAAAAGGAGCCATCATCAGTGGCTAATGCAATTCAAGTGGAAGTGGCAGAAGCCGTGGAGACTTTCTGAACGGATTCGACACAGTGATGAGACGGTCATAAGAGCAAGACCACGTTCACAGGCTTTGCCTCAAATTTTTCCTACACAAGGCATTAGAAAGAACAAAAAAACTAGGTGCAGTGTGATGATACAAATGGTTGCTAACAATATACACCCCTATCAATCTTGGTTAATACTGCCAAAATATTGGAAATGTTTCCGTAGTAACAGCATATGGAGCATCTTGTGA 3183 0.4053 METEEDCCVKVAVHVRPLINDEKLQGCKDCVTVVSGKPQVQIGAHSFTFDHVYGSTGSPSSAMFDECVASLVDGLFQGYNATVLAYGQTGSGKTYTMGTGSKDSYQTGIVPQVMSALFSKIETLKHQIEFQLHVSFIEILKEEVKDLLDLSSMNKPDTANGHAGKVTIPGKPPIQIREASNGVITLAGSTEVSVATLKEMSACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLNSPSEISLNDTMNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINKGLLALGNVISALGDDKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPVVNRDPMSSEMLKMRQQLENLQAELCARSVQVLKERISWLEAANEDLCRELHEHRSRFSVGEKDAYDGSMCNVKTDGLKRGLPITTSDYPMSESTAGDSREIEEVAKEWEHTLLQNSMDRELHELNKRLEQKESEMKLFGVSDAETLKQHFGRKIMELEDEKRTVQQDRDRLLAEVENLAAGSDGQTQKSEDIHAQKLKALEAQILDLKKKQESQVQLLKQKQKSDEAAKRLQDEIHSIKAQKVQLQQRIKQEAEQFRQWKATREKELLQLRKEGRRNEFERHKLQALNQRQKMVLQRKTEEAAMATKKLKELLEARKSSSRDTSGIYNEKSLQRWLDHELEVMVKEHEVRFEYEKQSQVRAALAEELAMLKQVNEFAASGLSPPRGKNGFARAFSMSLNARMARIASLENMLSISSNSLVAMASQLSEAEERERAFANRGHWNQLRSMGEAKNLLQYMFNSLADTRCQLWERDMEIREMKDQIRELVGLLRQSEIKRKEVEKELKVREQDVATPLAKPASGNSPNSLKHCAEDIKEPLSPESVPAQKQLKYTPGITNGQVRESAAFIDQSRRMVPIAQLSMKKLAIAGHASGKLWRWKRSHHQWLMQFKWKWQKPWRLSERIRHSDETVIRARPRSQALPQIFPTQGIRKNKKTRCSVMIQMVANNIHPYQSWLILPKYWKCFRSNSIWSIL 1060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03416 1060 Coils Coil 844 878 - -
Car04g03416 1060 Pfam Kinesin motor domain 15 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car04g03416 1060 ProSitePatterns Kinesin motor domain signature. 258 269 IPR019821 GO:0003777|GO:0005524|GO:0007018
Car04g03416 1060 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-LIKE PROTEIN 2 1010 - -
Car04g03416 1060 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 2 1010 - -
Car04g03416 1060 PRINTS Kinesin heavy chain signature 216 233 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car04g03416 1060 PRINTS Kinesin heavy chain signature 313 334 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car04g03416 1060 PRINTS Kinesin heavy chain signature 259 277 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car04g03416 1060 PRINTS Kinesin heavy chain signature 78 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car04g03416 1060 Gene3D Kinesin motor domain 1 393 IPR036961 -
Car04g03416 1060 CDD KISc_KIF4 7 364 - -
Car04g03416 1060 Coils Coil 397 417 - -
Car04g03416 1060 ProSiteProfiles Kinesin motor domain profile. 8 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car04g03416 1060 Coils Coil 522 542 - -
Car04g03416 1060 Coils Coil 663 683 - -
Car04g03416 1060 Coils Coil 558 630 - -
Car04g03416 1060 Coils Coil 482 502 - -
Car04g03416 1060 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 395 IPR027417 -
Car04g03416 1060 SMART kinesin_4 6 371 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03416 Car-Chr4 62839832 62850503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03416 9 389 Miscellaneous Gene Families AT5G06670 36.573 6.56e-53 196
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03416 04 62839832 62850503 Car04g03416 04 62839832 62850503 ECH
Car04g03416 04 62839832 62850503 Car05g02760 05 72688138 72700301 PCT