Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03414 ATGAGTTGTAACATTCCTTCAAAATTGTTGCTGACAACATTGTTCATGTTCTTTGTATTCAAAACAGAATCATTAGTATTTTCAGACCAAAGACTTGCAAAAGTATATCCAGTGATTCAAAAATTCAAGTCTTTGATTACTTCAGATCCATTAGGTGTAACAAAATCATGGGTTGGTTCAAATATATGCAACTACAAAGGTTTCTATTGTGATAATCCACCAGATAACAACTCTGCTATTGCTTTAGCTTCAATTGATTTCAATGGTTTTCAACTTTCAGCTTCAACACTTGATGGTTTCATTGATAAACTTCCTGATATTGCTCTTTTTCATGCAAATTCTAACAATTTTGTTGGATCAATCACACCCCTAATAAGAAATTTACCTTATCTTTATGAGCTTGATTTAAGCAACAATAAATTATCAGGTCCTTTTCCAAATTCTGTTCTTGGTATGAACAGTTTAACATTCTTGGATTTAAGGTTCAATTTTTTCTCTGGTGGAGTACCACCACAAATTTTCACAGAAAATCTTGAAGTACTTTTTATTAACAACAATTTATTGACACAAAATTTGCCTGATAATTTTGACACAACAAAAAGTGGTAATCATATTTTTTTACTAACTTTGGCTAATAACAAATTTTCTGGTCCAATACCAAGAAATCTTCCTAAGGCTTTGTCAACTTTAGCTGAGGTTGTTTTGTTAAACAATGATTTAACAGGTTGTTTACCTTATGAAATTGGTTACCTTGAAGAAGCTATTGTTTTTGATGTTGGAAATAATCAACTTACTGGTCCTTTACCTTTGTCTCTTAGTTGTCTTGAGAAAGTTGAGGTTGTTAATTTGGCTGGTAACATGTTTTATGGGATGGTGCCAGATGTTTTGTGTGAAGGGTTGGAGAATTTGGTTAATTTTTCTTTGTATGATAACTATTTTACTCATGTGGGACCCTTTTGTAGGATGTTGATTGAAAGAGGTATTCTTGATGTTGGAAAGAATTGTATTCTTGATCTTCCTTTTCAGAGATCAGTGATTGAATGTGCTGATTTCTTTTCAAGACCAAAGATGTGTCCTTTCATGTGGTTTCATAGTTTTTTTCCTTGTAATGTTCCTTTAAAAAAATCACATGTTTCTTCCATTCCTTAG 1149 0.3194 MSCNIPSKLLLTTLFMFFVFKTESLVFSDQRLAKVYPVIQKFKSLITSDPLGVTKSWVGSNICNYKGFYCDNPPDNNSAIALASIDFNGFQLSASTLDGFIDKLPDIALFHANSNNFVGSITPLIRNLPYLYELDLSNNKLSGPFPNSVLGMNSLTFLDLRFNFFSGGVPPQIFTENLEVLFINNNLLTQNLPDNFDTTKSGNHIFLLTLANNKFSGPIPRNLPKALSTLAEVVLLNNDLTGCLPYEIGYLEEAIVFDVGNNQLTGPLPLSLSCLEKVEVVNLAGNMFYGMVPDVLCEGLENLVNFSLYDNYFTHVGPFCRMLIERGILDVGKNCILDLPFQRSVIECADFFSRPKMCPFMWFHSFFPCNVPLKKSHVSSIP 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03414 382 Gene3D Ribonuclease Inhibitor 37 203 IPR032675 -
Car04g03414 382 SUPERFAMILY L domain-like 38 337 - -
Car04g03414 382 Gene3D Ribonuclease Inhibitor 204 348 IPR032675 -
Car04g03414 382 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 20 380 - -
Car04g03414 382 Pfam Leucine Rich Repeat 131 150 IPR001611 GO:0005515
Car04g03414 382 PANTHER BNAA09G53810D PROTEIN 20 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03414 Car-Chr4 62824298 62825661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03414 24 357 Leucine-rich Repeat extension Gene Families AT3G24480 42.216 2.62e-80 253
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03414 04 62824298 62825661 Car04g03414 04 62824298 62825661 ECH