Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03409 ATGGGCCAAACAGCTTCCACGGCCACCGTCGCTTACCGCCGGGAAAGCGTACAAGGCCATCGATCTACAAATACCACAAAAACAACCAGATCTACCGACTTAGTGTTTCCGATGACCGCCGGCGAAGACGAAGATGATAACAGAGATCCGGTTCACGGTGAAAACTCCGATTATATATCAGATCTACCTGACGAGTGTTTAGCTATAGTGTTTCAGTCGCTGAGCTCCGCCgatcggaaccggtgttcactcgtctgccggcggtggcttctggttgaaggacagagccgtcaacgtttatcgttaaacgcgcaattggatcttcttccGGTAATTGATTCTCTCTTTACTCGATTCGATTCGGTTACGAAACTCGCGTTGAAATGCGATCGTAGATCTGTTAGCATAAGAGACGACGCACTCGTTTTAATCTCCGAGCGTTGCCCTAATCTCACGCGCCTTAAGCTCCGCGCGTGTCGCGAACTTACCGACGCTGGAATGGAAGGTTTCGCTAAGAACTGTAGAGGATTGAAGAAACTATCGTGTGGATCTTGCACTTTTGGATCCAAAGGTATGAACGCGATTCTCGATAACTGCGCCGCGCTGGAAGAATTGTCGGTGAAGCGCCTCCGTGGAATTGCGGAGACTGCGGTGGCGGAGCCGATTGGGCCGGGAGTAGCCGCGGCGTCGTTGAAGACGATTTGTTTGAAAGAGCTTTACAATGGACAGTGTTTTGGTTCATTGATTCTTGGAGCTAAGAATCTAAAGACATTGAAGCTTTTTCGATGTTCGGGTGATTGGGATACGCTTTTTCAGCTCATGGCGGAAAGGGTTAAGAGCATGATTGTTGAGTTTCACTTTGAGAGGCTTCAGATTAGTGATATTGGATTGCAAGCTATTTCATACTGTTCCAATTTGGAGATTTTGCATCTTGTTAAAACACCTGAATGCACTGATATTGGACTTGTTACAATTGCTGAAAGATGCAAGCTTTTGAGGAAGCTTCACATCGATGGTTGGAAGGCAAATCGGATTGGGGATGAAGGGTTAATTGCTGTTGCTAAATTTTGCCCTAATTTACAGGAATTGGTGCTTATTGGTGTTAACCCTACAAAAGCTAGTTTGGAAATGTTGGCATCTAATTGCCCTAATTTAGAGAGGTTGGCTTTGTGTGCAAGTGATACTGTTGGTGATCCTGAGATATCTTGCATTGCTGCTAAGTGTTTGGCTTTGAAGAAACTTTGCATTAAGAGTTGTCCTGTTTCTGATCATGGGATGGAAGCTTTGGCAAATGGGTGCCCTAATTTGGTGAAAGTGAAGGTTAAGAAGTGTAAGGGTGTTACCCCTGAGGGTGGTGATTGGTTGAGGCTCACTAGGGTTTCTGTTGCTGTTAATTTGGATACTGTCGAAGCGGAACACCAAGATGCTAGTGCTAGTGATGGTGGAGCACAAGAGACTGGCATAGAGTTTCCTCCAATGCCTGGCAATACAGCAGCGTCTTCATCGACAAGTAATGCATCAAGAAGTACTGTTCGATCGAGTTCATTCAAGCAAAGGTTAGGACTTTTGTCTGGGAGGAATATAGTTGCTAGTACATTGAGAAGATGGTCAGGTGGTAACACTAGTGCTCGCCATGGTTAG 1641 0.4284 MGQTASTATVAYRRESVQGHRSTNTTKTTRSTDLVFPMTAGEDEDDNRDPVHGENSDYISDLPDECLAIVFQSLSSADRNRCSLVCRRWLLVEGQSRQRLSLNAQLDLLPVIDSLFTRFDSVTKLALKCDRRSVSIRDDALVLISERCPNLTRLKLRACRELTDAGMEGFAKNCRGLKKLSCGSCTFGSKGMNAILDNCAALEELSVKRLRGIAETAVAEPIGPGVAAASLKTICLKELYNGQCFGSLILGAKNLKTLKLFRCSGDWDTLFQLMAERVKSMIVEFHFERLQISDIGLQAISYCSNLEILHLVKTPECTDIGLVTIAERCKLLRKLHIDGWKANRIGDEGLIAVAKFCPNLQELVLIGVNPTKASLEMLASNCPNLERLALCASDTVGDPEISCIAAKCLALKKLCIKSCPVSDHGMEALANGCPNLVKVKVKKCKGVTPEGGDWLRLTRVSVAVNLDTVEAEHQDASASDGGAQETGIEFPPMPGNTAASSSTSNASRSTVRSSSFKQRLGLLSGRNIVASTLRRWSGGNTSARHG 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03409 546 Gene3D Ribonuclease Inhibitor 98 485 IPR032675 -
Car04g03409 546 Pfam Leucine Rich repeat 148 171 IPR001611 GO:0005515
Car04g03409 546 PANTHER F-BOX PROTEIN SKIP2 41 471 - -
Car04g03409 546 PANTHER UNCHARACTERIZED 41 471 - -
Car04g03409 546 SUPERFAMILY F-box domain 46 91 IPR036047 GO:0005515
Car04g03409 546 SMART LRR_CC_2 329 356 IPR006553 -
Car04g03409 546 SMART LRR_CC_2 174 198 IPR006553 -
Car04g03409 546 SMART LRR_CC_2 382 407 IPR006553 -
Car04g03409 546 SMART LRR_CC_2 148 173 IPR006553 -
Car04g03409 546 SMART LRR_CC_2 303 328 IPR006553 -
Car04g03409 546 SMART LRR_CC_2 433 460 IPR006553 -
Car04g03409 546 SMART LRR_CC_2 408 432 IPR006553 -
Car04g03409 546 SMART LRR_CC_2 357 381 IPR006553 -
Car04g03409 546 MobiDBLite consensus disorder prediction 495 512 - -
Car04g03409 546 MobiDBLite consensus disorder prediction 472 512 - -
Car04g03409 546 Pfam F-box domain 59 89 IPR001810 GO:0005515
Car04g03409 546 Gene3D - 58 97 - -
Car04g03409 546 ProSiteProfiles F-box domain profile. 56 100 IPR001810 GO:0005515
Car04g03409 546 SUPERFAMILY RNI-like 111 470 - -
Car04g03409 546 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03409 Car-Chr4 62755747 62758534 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03409 04 62755747 62758534 Car04g03409 04 62755747 62758534 ECH