Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03408 ATGGGTGGTTGGGCTATTGCTGTGCATGGTGGCGCTGGTGTTGATCCCAATCTCCCACTCAATCGCCAAGAAGAAGCCAAACAACTTCTTACCCGTGTTCTCAATCTTGGTATCTCTGCTCTTCGTTCCAATCTTTCCGCCATTGATGTTGTTGAACTTGTGGTGAGGGAATTGGAAACGGATCCAGTATTCAATTCGGGTCGTGGATCTGCCTTGACGGAAAAAGGAACGGTTGAAATGGAGGCTAGCATTATGGATGGCCCAAAAAGACGATGCGGTGCCGTTTCGGGTTTAACAACCGTCAAAAATCCCGTTTCACTCGCGCGTTTAGTCATGGACAAATCCCCTCATTCCTATCTTGCCTTTAACGGTGCTGAAGACTTCGCTAGACAACAGGGTGTGGAGGTTGTGGACAACGAATACTTTATCACCCCTGACAATGTTGGAATGCTTAAGCTGGCAAAAGAAGCAAATGCAATCCTGTTTGATTACCGAATCCCTGCATCTGGATATGAAACATGCGGTTCAGGGATTGAGAGTCCAATCCAAATGAATGGACTGCCGATAAGTGTATACGCACCGGAAACAGTCGGGTGCGTAGTGGTGGACCGTGAAGGGAGGTGCGCGGCCGCCACATCAACAGGAGGTCTAATGAACAAAATGATTGGACGAATTGGTGACTCGCCACTGATAGGAGCCGGGACCTACGCATGTGACCTTTGTGGTGTATCATGCACCGGAGAAGGCGAGGCTATCATTCGAGGCACTTTGGCACGTGAGGTGGGTGCTGTTATGGAATACAAAGGTCTTGGTCTTCAAGAGGCAGTGGACTTCGTCATCAAGCATAGGCTGGATGAAGGGAAGGCTGGGCTTATAGCTGTTTCGAATAAAGGAGAAGTCGCATATGGATTTAACTGCAATGGCATGTTTAGGGGATGTGCTTCTGAGGACGGGTTTATGGAGGTTGGAATCTGGGAGTAA 981 0.4883 MGGWAIAVHGGAGVDPNLPLNRQEEAKQLLTRVLNLGISALRSNLSAIDVVELVVRELETDPVFNSGRGSALTEKGTVEMEASIMDGPKRRCGAVSGLTTVKNPVSLARLVMDKSPHSYLAFNGAEDFARQQGVEVVDNEYFITPDNVGMLKLAKEANAILFDYRIPASGYETCGSGIESPIQMNGLPISVYAPETVGCVVVDREGRCAAATSTGGLMNKMIGRIGDSPLIGAGTYACDLCGVSCTGEGEAIIRGTLAREVGAVMEYKGLGLQEAVDFVIKHRLDEGKAGLIAVSNKGEVAYGFNCNGMFRGCASEDGFMEVGIWE 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03408 326 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 323 IPR029055 -
Car04g03408 326 Gene3D (Glycosyl)asparaginase 196 326 - -
Car04g03408 326 CDD Asparaginase_2 5 318 - -
Car04g03408 326 Pfam Asparaginase 4 325 IPR000246 GO:0016787
Car04g03408 326 PANTHER L-ASPARAGINASE 1 326 IPR000246 GO:0016787
Car04g03408 326 PANTHER PEPTIDASE T2, ASPARAGINASE 2, NUCLEOPHILE AMINOHYDROLASE-RELATED 1 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03408 Car-Chr4 62715870 62718243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03408 6 260 Miscellaneous Gene Families AT4G00590 29.137 6.39e-17 79.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03408 04 62715870 62718243 Car04g03408 04 62715870 62718243 ECH
Car04g03408 04 62715870 62718243 Car05g02764 05 72750868 72753203 PCT