Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03404 ATGGCTGATCAAGATAACTCCACGCGCCGTCCCCAACGTGAAGCAAAGAAAAGAGCAGCCGCTGCATTATGCGAACAACGAAAAAAGAAGCGCGTCGCTCTCAGCGACTTAACAAACACTAACAACAATATTAACGACGTCGTTTCACAAACGGAGAAACCTGTTTCTGATAGTCAAAAGCAGAAGAAGAAAAACGACTCTAAATCAACTCCCGTTGAATCTCCGGTAACGGAGAAATCGGAAGATCCTCAGTTATGTGGGACATACGTTTCCGATATTTACGATTACCTTCGTAAATTGGAGGTTGATCCTAGTAAAAGACCGTTACATGATTATATTCAGAAAATTCAGAGGGATATTAGTGCTATTATGAGAGGTGTTCTTGTGGATTGGTTGGTTGAAGTTTCTGAGGAATACAAGCTTGTTTCAGATACTCTTTATTTTTGTGTTTCTTACATCGATAGGTTTCTATCATTGAATGATTTAAGTAGACAGAAGCTTCAATTACTCGGTGTTTCTTCAATGTTAATTGCTTCGAAATACGAGGAGATAAAGCCACCTGAGGTGGAGGATTTTTGTTACATTACCGACAACACATACTCCAAAGAAGAGGTTTTGAGCATGGAAGCTGATATATTGAAGTCTTTGAAATTTGAATTGGGTGGCCCTACAATAAAGACATTTCTAAGAAGATTTACTAGAGTTGCTCAAGAGGGCGTTGATGCTTCTGAGTTGCAGTTTGAGTTCCTTTGCTGTTACCTTGCTGAGCTCAGTTTGTTGGATTATAATTGTGTAAAGTTCTTGCCTTCTATGGTGGCCGCATCAGTTGTATTTCTAGCACGATTTATGTTAAGCCCGAAGACTCATCCTTGGAATTCAGTGCTCTATCAACTCACCAGATATAAACCTGCTGAATTGAAGGAATGCGTTCTAAACTTACATGACTTGTATCTTAGTAGGAAAGGGGGTACGTTGCAAGCTGTGAGAGATAAATACAAACAACATAAGTTCAAATGTGTGGCAACAACACCCTCTCCTCCGGAGATATCTCTTTCTTATTTTGAATTTAGAGGGGCAGATCCTTAG 1086 0.3978 MADQDNSTRRPQREAKKRAAAALCEQRKKKRVALSDLTNTNNNINDVVSQTEKPVSDSQKQKKKNDSKSTPVESPVTEKSEDPQLCGTYVSDIYDYLRKLEVDPSKRPLHDYIQKIQRDISAIMRGVLVDWLVEVSEEYKLVSDTLYFCVSYIDRFLSLNDLSRQKLQLLGVSSMLIASKYEEIKPPEVEDFCYITDNTYSKEEVLSMEADILKSLKFELGGPTIKTFLRRFTRVAQEGVDASELQFEFLCCYLAELSLLDYNCVKFLPSMVAASVVFLARFMLSPKTHPWNSVLYQLTRYKPAELKECVLNLHDLYLSRKGGTLQAVRDKYKQHKFKCVATTPSPPEISLSYFEFRGADP 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03404 361 Gene3D - 108 221 - -
Car04g03404 361 PIRSF Cyclin_A_B_D_E 1 354 IPR039361 -
Car04g03404 361 MobiDBLite consensus disorder prediction 35 55 - -
Car04g03404 361 SUPERFAMILY Cyclin-like 223 347 IPR036915 -
Car04g03404 361 CDD CYCLIN 124 213 IPR013763 -
Car04g03404 361 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 19 357 - -
Car04g03404 361 SMART cyclin_7 130 214 IPR013763 -
Car04g03404 361 SMART cyclin_7 227 315 IPR013763 -
Car04g03404 361 CDD CYCLIN 223 314 IPR013763 -
Car04g03404 361 Pfam Cyclin, C-terminal domain 223 345 IPR004367 -
Car04g03404 361 MobiDBLite consensus disorder prediction 1 83 - -
Car04g03404 361 ProSitePatterns Cyclins signature. 125 156 IPR006671 -
Car04g03404 361 Gene3D - 92 342 - -
Car04g03404 361 SMART Cyclin_C_2 223 346 IPR004367 -
Car04g03404 361 Pfam Cyclin, N-terminal domain 92 220 IPR006671 -
Car04g03404 361 PANTHER CYCLINS 19 357 IPR039361 -
Car04g03404 361 SUPERFAMILY Cyclin-like 81 220 IPR036915 -
Car04g03404 361 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03404 Car-Chr4 62680981 62684050 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03404 1 355 Core Cell Cycle Gene Families AT5G43080 60.388 3.11e-150 426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03404 04 62680981 62684050 Car04g03404 04 62680981 62684050 ECH
Car04g03404 04 62680981 62684050 Car05g02771 05 72833585 72835978 PCT