Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03398 ATGAACATTTTCAAGTCTCTTCAAGTTGTTCTGCTGCTATTATTCTGCAGCAGACACACCATAGCAGAAACCAAATCACCACAAACCAAAAACACATACATAATTCACACGGACAAATCCACCATGCCACAAACTTTCACTGACCACCTTAACTGGTTCGATTCATCGCTAAAATCAGTATCAGAAACAGCAGAGATTCTCTACACATACAAACATGTAGCTCATGGATTCTCCACAAGACTAACACTTCAAGAAGCTGACACACTTTCAAAACAACCAGGAATTCTCTCTGTTACCCCTGAACTAAGATACCATCTTCACACAACAAGAACACCACAGTTCCTAGGATTACCAAAAACCAACACTCTTTTACCTAACTCTAACCAACAGAGCCAGGTGATTATCGGTGTTCTCGACACTGGTATATGGCCAGAGCTAAAAAGCTTAGACGACACAGGACTTGGTCCAATACCAAGTAACTGGAAAGGAGAGTGTGAAACAGGTAACAATATGAACTCATCAAACTGCAACAAAAAACTCATAGGTGCAAGGTTTTTCTCAAAAGGGTATGAAGCAGCACTTGGTCCAATAGACAAAACAACAGAATCAAGATCAGCGAGAGACGATGATGGTCATGGAAGCCACACTTTAACAACAGCAGCAGGTTCTGAAGTAGCAGAAGCTAGCCTTTTTGGCTTAGCTTCTGGTACAGCAAGAGGCATGGCTACACAAGCCCGTGTAGCAGCTTATAAAGTGTGTTGGCTAGGTGGTTGTTTCACTTCCGACATAGCTGCCGGAATCGATAAAGCAATAGAAGACGGTGTCAACATCTTATCCATGTCAATTGGTGGTAGCACAATGGATTACTTTAGAGATATCATAGCAATTGCACCATGGATAACAACAGTCGGAGCCGGAACAATCGATCGGGATTTCCCGGCTTACATAACACTCGGAAACGGAAAAACATACACAGGTGCATCACTCTACAATGGAAAACCTTTAACTGATACATTGCTACCATTAGTTTATGCAGGCAAAGTTGTTGTATGTGAAAGAGGTGGAAACTCAAGAGTTGAAAAGGGTCTTGTTGTGAAAAGTGCTGGTGGAATTGGAATGATTTTAGCAAACAATGAAGAGTATGGTGAGGAGTTAATTGCTGACTCTCATCTTCTACCAGCAGCATCATTGGGTCAAAAATCAAGCACAATATTAAAAGATTATGTTTTTAATTCACCAAATCCAAAAGCTAAAATTGTTTTTGGTGGAACACATTTACAAGTTCAACCTTCACCGGTTGTAGCAGCGTTCAGTTCAAGAGGACCAAATGCTCTAACACCAAAGATTCTTAAACCGGATTTAATAGCACCGGGTGTAAACATTTTAGCCGGCTGGACCGGTTCAGTTGGACCAACCGGTTTAACACTAGACAAGAGGCACGTGAGTTTCAACATTATATCGGGGACCTCAATGTCGTGTCCTCACGTGAGTGGTTTAGCTGCAATTTTAAAAGGAGCTTACCCTGATTGGAGTCCCGCTTCTATACGGTCAGCACTAATGACCACAGCATACACCTCTTATAAAAACGGACAAACAATCGAAGATGTTGCAACCGGGAAATCCGCTACGCCTTTCGATTTCGGATCGGGACACGCGGACCCTGTATCCGCCCTTGATCCTGGTCTTGTTTACGACGCCAACGTGGACGATTATCTTGGATTTTTCTGTGCGTTAAACTACACGTCGTTTCAAATCAAACTTGCAGCGAGAAGAGAATACACGTGCGATCCAAAGAAGAAATTTAGGGTTGAAGATTTTAACTATCCTTCTTTTTCTGTTCCTTTTGAAACTGCTTCGGGAATTGGTGGTGGTTCATCAGAACCGGTCAGTGTTGAATATAATAGGGTCCTAACGAATGTTGGAACTCCGGGAACTTATAAAGCTTCGGTGGTGGTGTTACCGGTGGGTTCTTCGCCGGTGAAGGTAGTGGTGGAACCGGAGACGATTAGTTTTAAAGAACTGTATGAGAAGAAGGGTTATACCGTGCGGTTCACGTGCAGTTCGATGCCTTCGGGAACTACGAGTTTTGGTTATTTGGAATGGAATGATGGGAAGCATAGGGTTGTGAGTCCAATTGCGTTTAGTTGGACTTGA 2154 0.428 MNIFKSLQVVLLLLFCSRHTIAETKSPQTKNTYIIHTDKSTMPQTFTDHLNWFDSSLKSVSETAEILYTYKHVAHGFSTRLTLQEADTLSKQPGILSVTPELRYHLHTTRTPQFLGLPKTNTLLPNSNQQSQVIIGVLDTGIWPELKSLDDTGLGPIPSNWKGECETGNNMNSSNCNKKLIGARFFSKGYEAALGPIDKTTESRSARDDDGHGSHTLTTAAGSEVAEASLFGLASGTARGMATQARVAAYKVCWLGGCFTSDIAAGIDKAIEDGVNILSMSIGGSTMDYFRDIIAIAPWITTVGAGTIDRDFPAYITLGNGKTYTGASLYNGKPLTDTLLPLVYAGKVVVCERGGNSRVEKGLVVKSAGGIGMILANNEEYGEELIADSHLLPAASLGQKSSTILKDYVFNSPNPKAKIVFGGTHLQVQPSPVVAAFSSRGPNALTPKILKPDLIAPGVNILAGWTGSVGPTGLTLDKRHVSFNIISGTSMSCPHVSGLAAILKGAYPDWSPASIRSALMTTAYTSYKNGQTIEDVATGKSATPFDFGSGHADPVSALDPGLVYDANVDDYLGFFCALNYTSFQIKLAARREYTCDPKKKFRVEDFNYPSFSVPFETASGIGGGSSEPVSVEYNRVLTNVGTPGTYKASVVVLPVGSSPVKVVVEPETISFKELYEKKGYTVRFTCSSMPSGTTSFGYLEWNDGKHRVVSPIAFSWT 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03398 717 ProSitePatterns Serine proteases, subtilase family, serine active site. 488 498 IPR023828 -
Car04g03398 717 CDD PA 309 407 - -
Car04g03398 717 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 296 348 - -
Car04g03398 717 Pfam Peptidase inhibitor I9 32 107 IPR010259 -
Car04g03398 717 Pfam Subtilase family 131 534 IPR000209 GO:0006508|GO:0008236
Car04g03398 717 SUPERFAMILY Subtilisin-like 106 562 IPR036852 GO:0004252|GO:0006508
Car04g03398 717 Pfam PA domain 343 401 IPR003137 -
Car04g03398 717 CDD Peptidases_S8_3 104 524 IPR034197 -
Car04g03398 717 MobiDBLite consensus disorder prediction 199 218 - -
Car04g03398 717 Pfam Fibronectin type-III domain 605 713 IPR041469 -
Car04g03398 717 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 16 107 IPR037045 -
Car04g03398 717 PRINTS Subtilisin serine protease family (S8) signature 208 221 IPR015500 -
Car04g03398 717 PRINTS Subtilisin serine protease family (S8) signature 130 149 IPR015500 -
Car04g03398 717 PRINTS Subtilisin serine protease family (S8) signature 487 503 IPR015500 -
Car04g03398 717 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 296 348 IPR045051 -
Car04g03398 717 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 21 296 - -
Car04g03398 717 ProSiteProfiles Serine proteases, subtilase domain profile. 103 558 - -
Car04g03398 717 Gene3D Peptidase S8/S53 domain 133 297 IPR036852 GO:0004252|GO:0006508
Car04g03398 717 Gene3D Peptidase S8/S53 domain 427 571 IPR036852 GO:0004252|GO:0006508
Car04g03398 717 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 346 715 - -
Car04g03398 717 Gene3D - 575 716 - -
Car04g03398 717 Gene3D - 341 426 - -
Car04g03398 717 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 21 296 IPR045051 -
Car04g03398 717 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 346 715 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03398 Car-Chr4 62630615 62633073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03398 9 717 Subtilisin-like Serine Gene Family AT5G67360 57.667 0.0 878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03398 04 62630615 62633073 Car04g03398 04 62630615 62633073 ECH
Car04g03398 04 62630615 62633073 Car05g02785 05 72909741 72912199 PCT