Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03389 ATGTCCTCCGTTGAACAGCCTCTAAAGAAGCGAAAGCTCTACGACTCTTCACCGTCGGACTCCCCACACTCTCCACCGCCGCAGCCGGAATCAACCGCCCCCTTTCCTCAAACCCTACCTCCTCAACCGTTCTCTCAGGATGAGATTCTCGCCAAGCGAAGAAATAAAGACGCAATTCGAAACCTCTACGAATGTCACAAGCGAATTAAACGTTGCCTCTTACAGAAACACGTTCCACCCACACCTGATCTTGACCAGAACTATCTTGCTCTCATCGCTTCTTCCAGAGGTTGTATGAGTGTAAAAAGAATTGTGGCCGATTTTATTCCTCGATATGCATGTCACTGTCCAACAGCTTTGGAAGCTGCAACTAAAGTGCTTATCAATATGCATAACTGGAGTTTGGCATTGATCAGTAAGGAAGGGGATTCCAGTGGTATTGCATTTGAAACTGCCAAAGCCTGTATATTCGGCCAGGCTGATATTTGCTGCACTGCTTCTTCCGTAGCACCAACATCAGCTGTAATTAGAGGAATTTGCTCAACAGTTTTCCAAAATGTGCTCACCTTCTTTGTTGTCTCATTTGAGGGAAAGGATGTCTTAAAGATTATTGACAAGAATTTCTTGAATATGCAAGATAACCCTGAGGTCTTTTCTGAATTAAAACAAAAGGTTTTAGATGAAGATGAATCTTCATTGACTAATTTGTTCAAGCTGTGTGCATTATGTCTACTTTGGATATTCTTCTCTTGTCCAAAAGAAATGCTTGCAGCTTGTTTGGAACTCTTAGGCTCCACCACAAAAGATGGAACTTCTAATGAAGGACAGCATTTTTTGGGCCTGATGACTAGCATGTTTAATGATGAAGCAGATCACCTTTTGGATAGAGAAAATGATGGTCCTAAATCATGTATTGATTCTATTGGGGAAGGCATCAAAGAGATTGAGGTTGGCGAGAAAATTATCACTGATGAAAACCATATCTCTGATGCTATTCGAAAGAGCTGCTTGCTTATGCTGGTTCTCAACAAGGACCCCTCACTGCGGAAATGGACTCTTCGTAGATGTAAGAAGTTACTTGACTCGCTCACTAGTGCTTCACTGGAAACTACATCACTATTGCAAGGAGTTATTGGAATGCTCTCCCAACAGACAGAGTTAGAAGTCTGTCAAGTAGACAGTGATGAAGATAAGTCCGATTCTTCAATTTACATGAATAGTAACTATGTAGTTCCTAGGATCTCCGAGGAACATGAAAGTATTGGTGAAACATCACGGAAAGCAGGTTCGCATTTTGATAATGGAGGGATCTCAAGGTCTATGGGCATTGAGAAAGGTGAGGAAGGGAATATGACCCATGTTAGATGTTCCACACCTAGGGACTCAGTAAGCCATCATATGTTCTCACCTGGAGTTAGAACAGTGGTAGACTTTAGGAGTAATTCATTTGAAGGTAGAAATGATTTCCCAAATGTTGAGAAAAATCAAGTATTGAATATAAATTTCAATTCACCTCTGTCGAGGTCCTCTAGTGGAGCTGTCAGCAATGTTCTGGCTTCTCCTAATCATCAATTTATGTCACCAACTATTTTAACCAAAAGTCAAATTGTTTGGTGCTGTGATGGGGATCCTGCTGCTCTAGATATTGTCGCTGCTTCTAAGCAGCTATGGGTAGGCTGTGTAGCACCTGACATGCCTGAAAGCCATATTAGGTTTCAAATAGAGAGGTTTGGTCATATTGAAAGGTTTATTTTCTTCCCAGTGAAAAGTTTTGCTTTGGTCGAGTACAGAAGGATAACTGATGCAATAAAAGCTCGACATTATGCACCTGGAAATTTTCATTGCCGTGTAAAATTCATGGATATAGGACTTGGTACTAGGGGTGCAGTGAATGGTGTTGTTGTTGGCTCTAGTTCTCATATTTATGTTGGAAATATTTCCAGTCAATGGGCCAAGGATGAGATCCTTCATGAATCAAGGAAAGCAGTCTATAAGGGTCCTCTCACGGTGATTGAACTTAATTGTGAGTGCGCATTACTCATGGAGTTTGAAACCCCTGAAGAAGCTTCCTCTGTCATGTTGCATCTGAGACAATTCCGAAGAGAAAGAAGTAATTATAACCTGCATTTTGGTCCAGGAACAGCTAATGTGGGAAGTGGGCATGCTTATATGGATGGTGCAAGACCTTTGCCCGCCCCTGCACATCTGGACCCCAAGGTCAACAACTCTGCTGGATCACCTCATGCTCAAACTTTACCTGGGAGCCCTGCTGACAGCAGTCGAACAAGAATGTCTCACTTGTCTAACATACTAGCTTCATTGCGCGCCAAGTATAATACTAATCAAAACATAGGTCTTCATGATAATTATATGACTGGAAATAGTTGCACTTCTTCCATGCGTGAGGAAGATGCCGTGCCATCCAGCACTCTGTGGATCACTATTCCTCACAGTAGCTCCCAGTTTCTTACAGAAGATGAGCTAATGAGTATTTGCAATCTTGCTATTGGAAACTCCGGCTCCATTGCACGGTTGACACGAGCAAATATGCACATGGGATGTGGTTGGTTTGTTGAATGTAGTAATGTAGATGGTGCAGTTTCTGTTTTAAAGAATCTTCGTGGTTGTCCAGGATTGTTCTTCCAAATAGAATTCAGCAAATCTGGAAATCAGAATGCTGTACCATTTTCAATTAAACCTGAGAACCATGCTATGGAACTTGTATCCCCCAGGATAAATGCTGAGAATCATAGCAGTGGAGTACATGGTGCACCTCTGTCTCAGTCAAACTGGCACTTCCCTGAATCCAGGGAGATAGCCGAAATTGGAGGAAGGAAACCTGATGGTTATGATAATTTATCAGTGGATCCTCATCAAGGAGGAAATGTTCCACATGTGTATTCTGGAACACACGGACCTTCAATTCCACCACCACAACAAATTCAGTCATCTCCTTTCACGCGACCTGTTTATGTTCCTCCTAATGGGCCATGGGATCCTCGTGGAATAAATAATCAGTTACCTGTCAACCAATTCCAGGCAGGAGTAATGCCAAATAATTTTCATGGCAGTCCTTTTATACCTGCTTCAGCAACTCCACTTGCTCAGATACCTCCATCAATTGCACCACCACCTTTATCATCTTTGCCACCTCCTCAGCTTGAAATGccaccttctcatccgcgtcctccttctccgcctcctctcccccagactcagccacccttggttcctccaccacctggttctcctcctcctccacctcccccaccACTGCCTGTCCAAGAACCAGTCAATATGGAGTGTTCAGGGCAGCCTCTGCAGTATCAGTGGCAGGGAAATCTCTGTAAAAGTGGAGTTAGCTACTGTACAATTTATGCATGCAGAGCAGATTCAAATATTTGCGGATACTCGAATGCCATGCCTGAGCCTGCTGAATGGCCCACCAAATTAGACATGACTAAACGCACAGATTTTCGACATGTGCAATCAACATTTGCTGCTACTCCAACTCATAGAAGGGAAGTGTGCCGTTTAGTCCCATCTTCCACAAGTGACGACAGAAGGTTTCAGGATTTCATATCATACTTAAAACAGAGAGATTGTGCTGGAGTTATTAAAATCCCAGCTTCAAAATCCATATGGGCAAGGTTGCTATTCATACTTCCTCATTCACTTGAAACATGTTCGTTGCTTTCTATTGCACCCAATCCATCTGATTGCCTAATTGCTTTGGTTCTACCCAAAGAAACAAACTTTGAGTGGATATGA 3771 0.4118 MSSVEQPLKKRKLYDSSPSDSPHSPPPQPESTAPFPQTLPPQPFSQDEILAKRRNKDAIRNLYECHKRIKRCLLQKHVPPTPDLDQNYLALIASSRGCMSVKRIVADFIPRYACHCPTALEAATKVLINMHNWSLALISKEGDSSGIAFETAKACIFGQADICCTASSVAPTSAVIRGICSTVFQNVLTFFVVSFEGKDVLKIIDKNFLNMQDNPEVFSELKQKVLDEDESSLTNLFKLCALCLLWIFFSCPKEMLAACLELLGSTTKDGTSNEGQHFLGLMTSMFNDEADHLLDRENDGPKSCIDSIGEGIKEIEVGEKIITDENHISDAIRKSCLLMLVLNKDPSLRKWTLRRCKKLLDSLTSASLETTSLLQGVIGMLSQQTELEVCQVDSDEDKSDSSIYMNSNYVVPRISEEHESIGETSRKAGSHFDNGGISRSMGIEKGEEGNMTHVRCSTPRDSVSHHMFSPGVRTVVDFRSNSFEGRNDFPNVEKNQVLNINFNSPLSRSSSGAVSNVLASPNHQFMSPTILTKSQIVWCCDGDPAALDIVAASKQLWVGCVAPDMPESHIRFQIERFGHIERFIFFPVKSFALVEYRRITDAIKARHYAPGNFHCRVKFMDIGLGTRGAVNGVVVGSSSHIYVGNISSQWAKDEILHESRKAVYKGPLTVIELNCECALLMEFETPEEASSVMLHLRQFRRERSNYNLHFGPGTANVGSGHAYMDGARPLPAPAHLDPKVNNSAGSPHAQTLPGSPADSSRTRMSHLSNILASLRAKYNTNQNIGLHDNYMTGNSCTSSMREEDAVPSSTLWITIPHSSSQFLTEDELMSICNLAIGNSGSIARLTRANMHMGCGWFVECSNVDGAVSVLKNLRGCPGLFFQIEFSKSGNQNAVPFSIKPENHAMELVSPRINAENHSSGVHGAPLSQSNWHFPESREIAEIGGRKPDGYDNLSVDPHQGGNVPHVYSGTHGPSIPPPQQIQSSPFTRPVYVPPNGPWDPRGINNQLPVNQFQAGVMPNNFHGSPFIPASATPLAQIPPSIAPPPLSSLPPPQLEMPPSHPRPPSPPPLPQTQPPLVPPPPGSPPPPPPPPLPVQEPVNMECSGQPLQYQWQGNLCKSGVSYCTIYACRADSNICGYSNAMPEPAEWPTKLDMTKRTDFRHVQSTFAATPTHRREVCRLVPSSTSDDRRFQDFISYLKQRDCAGVIKIPASKSIWARLLFILPHSLETCSLLSIAPNPSDCLIALVLPKETNFEWI 1256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03389 1256 MobiDBLite consensus disorder prediction 20 41 - -
Car04g03389 1256 PANTHER NUCLEIC ACID BINDING PROTEIN 1 1255 - -
Car04g03389 1256 SUPERFAMILY RNA-binding domain, RBD 547 613 IPR035979 GO:0003676
Car04g03389 1256 Gene3D - 545 627 IPR012677 -
Car04g03389 1256 MobiDBLite consensus disorder prediction 1035 1099 - -
Car04g03389 1256 MobiDBLite consensus disorder prediction 743 763 - -
Car04g03389 1256 MobiDBLite consensus disorder prediction 1 43 - -
Car04g03389 1256 SMART rrm1_1 555 618 IPR000504 GO:0003723
Car04g03389 1256 Pfam SPOC domain 1105 1248 IPR012921 -
Car04g03389 1256 MobiDBLite consensus disorder prediction 1037 1096 - -
Car04g03389 1256 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 1 1255 - -
Car04g03389 1256 MobiDBLite consensus disorder prediction 730 763 - -
Car04g03389 1256 MobiDBLite consensus disorder prediction 968 1001 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03389 04 62429697 62441785 Car04g03389 04 62429697 62441785 ECH