Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03383 ATGTTGTGTGCTTGTTCTGGAGAGCAATTCAAATTTGAAGAGGCACCACAGTCACCAGAATCCTTAGCAACAAGGGATTTTTCTGCCAGTGGATTATCTTCAAGGACTGGTGATTGGGAATCTAAATTGGATGAAACACAAGTTGAAGATGTTGAATCTACTCTGAAAGAAGCTCTCTCATTAAACTATGAGGAAGCTAGAGCTTTGTTGGGGAGGCTTGAATATCAAAGAGGGAACTTTGATGCTGCTCTTCAAGTGTTTCAAGGTATTGATATCAGGTCTTTGACACCAAGGATGATTAGAGCTATATCTGAAAGAAACAAGTTAAGGAAACCTCGTTCCAAGGCGGGTACTGTACTTCCTAATTTGATGTCAATGCATTCAGTAAGCTTGCTTCTTGAGGCAATTTTGCTTAAAGCCAAATCCTTAGAGGAACTCGAGCGATATGCAGAGGCTGCAAAGGAGTGCAGAATAATTGTGGATATAATTGAATCAGCTCTTCCTAATGGAATGCCAGAGGGTATTGGTGAAGAATGTAAGTTGCAGGAAATGTTCCACAAAGCATTGGAGTTGCTTCCAAATCTATGGATCAAGGCGGGTTTTCTTGACGAAGCTGTCACTGCTTATCGGCGTACGCTGACCAAGCCGTGGAATTTGGAGCCTAAAAGGTTGGCCTGTCTACAAAAGGATTTAGCTACAACACTACTCTATGGTGGTGTCGAAGTAAACCTACCTTCTCACTTGCAAGTGAATGGTCCAACAACACCAATGACTAACATTGAAGAGGCGATACTTTTGCTATTAATACTATCCGGAAAAATGGCACTTCAGGAAATAGATTGGGATGCTGAAATAATGGACCATCTTTCATTTTCGCTTTCAGTTTCCGGGATGTTTGAATCATTGGCAGATTGTGTTGAGCAGATCCTACCTGGTATCTTTGATCGAGCCGAGAAGTGGTACACGCTCGCTCTTTGTTACAGTGCAGCAGGACACAATGAAACAGCCTTGAACCTTTTGAGGAAGGCTTGTGGTAGTTCTGAAGCAAAGCATATGCCTCATTTTCGTTCATATTTGTTTGGTGCGAAACTGTGTTCGCAATATCCAAATCACACTCATGAAGGCATCAAATTTTCACAACAAGTTATTGATCTAGCCAAGCATCAAAATGAACATTTTTTGAATCAAGGCCAACAAATTCTCGGTGTTTGTTACGGTGCTGCAGCTAGAACATCTGTACTGGATTCTGAAAGAATTATATTTCAAAAAGAATCTTTGAACTTCCTAAATAAAGCTGCTCTAACCGGAAATGATGATGCAGAAGCAACGTTCAGCCTTGGACTGGAAAATGCGATTCAGAGGAATCTAGATGCGGCTTATCACAACATAATAAGGTACTCAGACATGATGGTTGGAAGCTCTAGAAGAGGTTGGCAGTTGTTAGCACTCATAGTATCTGCACAACAAAGGTTTAAGGATGCAGAAACTATAGTTGATTTCACTTTAGATGACGCTGGGAACGTCGATCAGTTAGAGCTACTAAGACTCAAAGCTGTACTTCAAATTGCTCAGAAGCAACCAAAGCATGCAATAGAGACCTACAGAGTCTTGCTTGCAGTAATAGAAGCCAAAAAGGAGCTTTCTCTTCAAGCTAAGAACTTTGAGTTTGATCCAGCAAAAATATTCAGGGATGAGGCATTAACGGAACGGAAGTTGGAAATGGAAGCATGGCAGGATTTGGCAACCATTTATGCAGATCTTAATTCCTTTCTTGATGCAAAAGCTTGTGTTGACAAAGCTCAATTGCTAGAGTTTTTCTCTCCCAGAAGTTGGCATATTACAGGGATGTTGTTTGAAGCTCAATCATTATACAAGGAAGCCTTTGTTTCGTTCTCAATCTCATTGTCAATAGAACCTGATTATATTCCCAGTATCAATTCAACTGCGGAGTTGTTGATTAAACTCGGTATGCAATCGCTTCCAATAGCAAGAAGCTTTTTAATGAATGCTTTGCGATTGGAACCGACAAATCATGACGCGTGGTTCAACCTTGGAGTGGTTTCAAAAATGGAAGGTTCGTTACAACAAGCAGCAGATTGCTTTCAAGCTGCTTATGAGCTGAAGCTTTCAACTCCAGTGCAAAAGTTTGAGTGA 2154 0.4085 MLCACSGEQFKFEEAPQSPESLATRDFSASGLSSRTGDWESKLDETQVEDVESTLKEALSLNYEEARALLGRLEYQRGNFDAALQVFQGIDIRSLTPRMIRAISERNKLRKPRSKAGTVLPNLMSMHSVSLLLEAILLKAKSLEELERYAEAAKECRIIVDIIESALPNGMPEGIGEECKLQEMFHKALELLPNLWIKAGFLDEAVTAYRRTLTKPWNLEPKRLACLQKDLATTLLYGGVEVNLPSHLQVNGPTTPMTNIEEAILLLLILSGKMALQEIDWDAEIMDHLSFSLSVSGMFESLADCVEQILPGIFDRAEKWYTLALCYSAAGHNETALNLLRKACGSSEAKHMPHFRSYLFGAKLCSQYPNHTHEGIKFSQQVIDLAKHQNEHFLNQGQQILGVCYGAAARTSVLDSERIIFQKESLNFLNKAALTGNDDAEATFSLGLENAIQRNLDAAYHNIIRYSDMMVGSSRRGWQLLALIVSAQQRFKDAETIVDFTLDDAGNVDQLELLRLKAVLQIAQKQPKHAIETYRVLLAVIEAKKELSLQAKNFEFDPAKIFRDEALTERKLEMEAWQDLATIYADLNSFLDAKACVDKAQLLEFFSPRSWHITGMLFEAQSLYKEAFVSFSISLSIEPDYIPSINSTAELLIKLGMQSLPIARSFLMNALRLEPTNHDAWFNLGVVSKMEGSLQQAADCFQAAYELKLSTPVQKFE 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03383 717 ProSiteProfiles TPR repeat profile. 678 711 IPR019734 GO:0005515
Car04g03383 717 PANTHER PROTEIN NPG1 1 716 IPR043376 -
Car04g03383 717 Coils Coil 56 76 - -
Car04g03383 717 ProSiteProfiles TPR repeat profile. 608 641 IPR019734 GO:0005515
Car04g03383 717 Gene3D Tetratricopeptide repeat domain 256 542 IPR011990 GO:0005515
Car04g03383 717 Gene3D Tetratricopeptide repeat domain 32 239 IPR011990 GO:0005515
Car04g03383 717 SMART tpr_5 574 607 IPR019734 GO:0005515
Car04g03383 717 SMART tpr_5 678 711 IPR019734 GO:0005515
Car04g03383 717 SMART tpr_5 133 166 IPR019734 GO:0005515
Car04g03383 717 SMART tpr_5 317 350 IPR019734 GO:0005515
Car04g03383 717 SMART tpr_5 608 641 IPR019734 GO:0005515
Car04g03383 717 MobiDBLite consensus disorder prediction 14 44 - -
Car04g03383 717 SUPERFAMILY TPR-like 65 462 IPR011990 GO:0005515
Car04g03383 717 Gene3D Tetratricopeptide repeat domain 656 713 IPR011990 GO:0005515
Car04g03383 717 MobiDBLite consensus disorder prediction 21 37 - -
Car04g03383 717 SUPERFAMILY TPR-like 575 708 IPR011990 GO:0005515
Car04g03383 717 Gene3D Tetratricopeptide repeat domain 563 655 IPR011990 GO:0005515
Car04g03383 717 PANTHER PROTEIN NPGR1 1 716 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03383 Car-Chr4 62364632 62369206 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03383 1 716 Calmodulin-binding Proteins AT1G27460 57.778 0.0 840
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03383 04 62364632 62369206 Car04g03383 04 62364632 62369206 ECH