Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02084 ATGGAGAGTACTAGTTGGAAATCTAATGAGATATCACCAAATTGTCCAAGATGTGGTTCATCCAACACAAAATTCTGCTACTACAACAACTACAGCTTAACACAACCAAGATACTTTTGCAAAGGATGTAGAAGGTATTGGACAAAAGGTGGGTCCCTCAGAAATGTCCCTGTTGGTGGTGGCTGTAGAAAAAACAGAAGAGGTAACAACAACAACAAAATCTTAAGACAATCCTTTGATTCTCTCACTTTCAAAAATTCACCAAATTGTGACACTTCTTCAGATAACAACAACAATATCTCAATTGGTCATTGTTATGATCCTATGATGAGAAATATTACTAATGTTTCATCTTCTAGCTCCTCACCCAATATTGATCTTGCATTAGTTTATGCAAATTTTCTTAATCAAAAGCCTAATTGTGAAAATTCAAATCAAATTCAAACAACATCTTTTGATAGTCCTTCTCTAGAAAATTCAATGCTATCACCATCCAAAATTGTGACACATTTTAGTGAAAGTAATAATAATCATGAAATGTATTGTAGTGAGTTCAATTCTATGCAGAGCTTTCAGAAAGATGATAGAATTGATCATCAACAACAATGTAGTAATATTCATGATGATGATGGTGGTGTGAATTTTGAGCTGCCACCTTTGCCAGGTGAAGAGGAATCATCAGCACATGATGATGTTTTGTGGTCCAATTCTGATGAAATAATGATGAACCTTCCATTTCAAGTCACTCAACAACCAACACCACTTCTTGGACCTGAAATTGATCATGATGCTGACTTGTTGAATATTGGTAACTGGTGCCCTTTTGATTTTCCAAATGATGCTTCTTTTTCCAGGCCTTGA 861 0.3508 MESTSWKSNEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRRGNNNNKILRQSFDSLTFKNSPNCDTSSDNNNNISIGHCYDPMMRNITNVSSSSSSPNIDLALVYANFLNQKPNCENSNQIQTTSFDSPSLENSMLSPSKIVTHFSESNNNHEMYCSEFNSMQSFQKDDRIDHQQQCSNIHDDDGGVNFELPPLPGEEESSAHDDVLWSNSDEIMMNLPFQVTQQPTPLLGPEIDHDADLLNIGNWCPFDFPNDASFSRP 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02084 286 ProSitePatterns Zinc finger Dof-type signature. 15 51 IPR003851 GO:0003677|GO:0006355
Car04g02084 286 PANTHER DOF DOMAIN ZINC FINGER PROTEIN 164 282 - -
Car04g02084 286 PANTHER DOF DOMAIN ZINC FINGER PROTEIN 1 166 - -
Car04g02084 286 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 1 166 IPR045174 GO:0003700|GO:0006355
Car04g02084 286 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 164 282 IPR045174 GO:0003700|GO:0006355
Car04g02084 286 Pfam Dof domain, zinc finger 14 67 IPR003851 GO:0003677|GO:0006355
Car04g02084 286 ProSiteProfiles Zinc finger Dof-type profile. 13 67 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02084 Car-Chr4 26729248 26730108 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02084 6 281 C2C2-Dof Transcription Factor Family AT3G52440 38.966 2.17e-50 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Car04g02084 zf-Dof 4.3e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g02084 - - gmx:100787193 286.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g02084 04 26729248 26730108 Car04g02084 04 26729248 26730108 ECH