Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01591 ATGGGTCATTTCTTGTTCAACTTCATCCTCTTCATTTTCTTATGGGCTTCCCCATTAGCACACTCTCGAACCACACCCTACACTACTCCTAAAACCACACTTCTCAATGTTGCTACTTCAATTCAAAAAACATATCAAGTTCTCAACTTCAAACAACAACAACATAAGAGTTCTTTTTCTCCATCGTCATCATTAGCATCAGCGTCACTCTCTATGCAGCTGCATTCACGAGCATCCCTTCATAAACCTTCACACGCTGACTACAAGTCACTAACTTTAGCAAGACTCGCCCGCGACTCAGCCCGAGTCAACTCCATAGTGACTCAGTTAGATCCAAATTTCAATGTAGAGAAACTTTCTGGACCCATTATTTCCGGAACGAGTcaaggaagcggcgagtacttctcccgaatcggaatcggtgagccaccgagtcaagcttacatggtacttgacactggcagtgatataagctgggtacaatgcgcaccatgcgccgattgttaccaccaagccgacccaatcttcgagccgGCTTCGTCGGCTTCTTACGCGCCGCTCACTTGTGAAGCCGCTCAGTGTAAATGGCTTGATCAATCTCAGTGCCATAACGGTAACTGTCTCTACGAAGTTTCCTACGGCGACGGCTCCTACACCGTCGGCGACTTCGTAACGGAGACTGTTACAATCGGCGCTACTTCCGTTCGCAACATAGCCATCGGCTGCGGTCATAATAATGAAGGTTTGTTCGTCGGCGCAGCCGGCTTGCTCGGCTTAGGCGGCGGGCCGCTTTCTTTTCCGGCTCAGCTCAATTCGACGTCGTTTTCTTACTGTCTCGTAGATCGTGACTCTGACTTGGTTTCAACTATCGAGTTTGACTCTCCGTTTTCTCGTGACGCCGTTACCGCGCCGTTACGGCGTAACCCAGAGTTGAGCACTTTTTACTATGTAGGACTCACGGGAATTAGCGTCGGCGGCGAGTTACTTCCGATTCCGGAAACGAGTTTTGAGGTGGATCCCACGGGAAGTGGGGGGATAATCGTGGATTCCGGCACGGCGGTGACACGGTTGCAGAGCAACGTGTATAATTTAGTTCGTGACGCGTTTAAGAGAGGGACTAAGGATTTGCCGGCGACGAACGACGTGTCGTTGTTTGATACGTGTTACGACTTGTCGTCGAAGACGAGCGTGGAAGTTCCGACGGTGGCGTTTCATTTCGGAGAAGGGAAAGGGTTGGTGCTTCCGGCGAAAAATTACCTGGTACCGGTTGATTCGGTGGGGACGTTTTGTTTTGCGTTTGCTCCAACGATGTCATCTTTGTCAATCATCGGGAATATTCAGCAGCAAGGGACACGTGTCAGTTTTGATCTTGGCCGTTCAATTGTTGGATTTTCCCCAAATAGTTGCTAA 1410 0.4369 MGHFLFNFILFIFLWASPLAHSRTTPYTTPKTTLLNVATSIQKTYQVLNFKQQQHKSSFSPSSSLASASLSMQLHSRASLHKPSHADYKSLTLARLARDSARVNSIVTQLDPNFNVEKLSGPIISGTSQGSGEYFSRIGIGEPPSQAYMVLDTGSDISWVQCAPCADCYHQADPIFEPASSASYAPLTCEAAQCKWLDQSQCHNGNCLYEVSYGDGSYTVGDFVTETVTIGATSVRNIAIGCGHNNEGLFVGAAGLLGLGGGPLSFPAQLNSTSFSYCLVDRDSDLVSTIEFDSPFSRDAVTAPLRRNPELSTFYYVGLTGISVGGELLPIPETSFEVDPTGSGGIIVDSGTAVTRLQSNVYNLVRDAFKRGTKDLPATNDVSLFDTCYDLSSKTSVEVPTVAFHFGEGKGLVLPAKNYLVPVDSVGTFCFAFAPTMSSLSIIGNIQQQGTRVSFDLGRSIVGFSPNSC 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01591 469 PANTHER ASPARTYL PROTEASES 12 469 IPR001461 GO:0004190|GO:0006508
Car04g01591 469 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 149 160 IPR001969 GO:0004190|GO:0006508
Car04g01591 469 CDD cnd41_like 133 469 IPR033873 -
Car04g01591 469 Pfam Xylanase inhibitor N-terminal 134 285 IPR032861 -
Car04g01591 469 Gene3D Acid Proteases 293 469 IPR021109 -
Car04g01591 469 SUPERFAMILY Acid proteases 128 469 IPR021109 -
Car04g01591 469 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 12 469 - -
Car04g01591 469 Pfam Xylanase inhibitor C-terminal 315 465 IPR032799 -
Car04g01591 469 Gene3D Acid Proteases 112 292 IPR021109 -
Car04g01591 469 ProSiteProfiles Peptidase family A1 domain profile. 134 465 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01591 Car-Chr4 16409503 16411502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01591 124 469 Miscellaneous Gene Families AT1G77480 27.225 1.15e-22 98.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01591 04 16409503 16411502 Car04g01591 04 16409503 16411502 ECH