Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01590 ATGATGGATCATTCTCCCACTATCTCCTCTTCCTCTTCTGACTTCGCTTCCATACCCACCACCGATCAGAATGCGGCCCGGAGTATGAGAAGTGGCGACGGGAGTGAAATTGTGACCGCGGACCAATCGCGGCGGTGGCATGATGTTTTTTGGTTAGGAATATTTGTGATCCATTTGATTGCGTTAGGATTCCTTCTAGGTGTTCTTGGCCTAAATAGGTTTGAGAAAGAGAATAGACTTAACATTGATAGGTACACCCCTGGTCTTTCTGGGAATGCAGCCGCCGGGTTAACCGAGACTTACTGGCCGCTCTATGCCGTTGCTGGTGGAATTGGGACTGTTCTTGGATGGAGTTGGATGTTGTTGTTGGGTTCTCGGGCTACTCAAATGATGAAGGTGTCCGTTCACATCCTTACCACATATCTGGCTGTTATCAGTGTTTTGTGTTTCTGGACTGAGCAGTTTTTCTGGGGGGTTGCTTTTGCTATTGGTGCTGCTCTTCAGTTCTTGTATGTTATATCCGTCATAGACAGACTTCCATTTACGATGTTGGTTCTGCAAAAAGCTGTGAAGATGGTTTGGAATCTTCCTGAGGTTATGAGAGTGTCATATGCATTTATGTTTGTTGTGCTTTTATGGATGGTCTTATGGTCATTTGGAGCAGCAGGTGTTGTGGCTTCGAACCTTAGTGACGGGGGACGCTGGTGGCTTCTTGTGGTTTTCTCTGTAAGCTTATTTTGGACAGGTGCAGTGCTCTGTAATACTGTGCATGTTATAGTGTCTGGGATGGTGTTTCTTGTTCTTTCCCATGGTGGTAGAGAGGCAGCTTCAATTCCTGCCAACTCCTTAATGAAATCTTTACAATATGCCTTAACAACGTCTTTTGGTAGCATTTGTTATGGCTCATTATTCACCGCTGCTATTAGAACACTGCGATGGGAGATACGTGGACTTCGATCAAAGATTGGCAACAATGAGTGTTTGCTTTGTTGCGTTGATTTTCTTTTCCATCTTGTGGAGACTCTTGTTCGATTTTTTAACAAGTATGCCTATGTTCAGATTGCTGTTAATGGTAAAAGCTTTAACCATTCGGCTAGAGATGCATGGGAGTTATTCCAGTCAACTGGGGTTGAGGCACTCGTGGCGTATGATTGTTCGGGTGCCGTCCTGCTAATGGGCACCATTTTCGGCGGATTGATAACTGGAACTTGCTCTGGTGTATGGGCATGGATTAAATGGAGTGACAGAGTTATTATGATTGGGTCCACATCCATGCTAATGGGTATGGTTTTGGTTGGATTGGCAATGGTTGTGGTGGAGAGTGCTGTTACATCGATATATATTTGTTATGCAGAAGACCCTTTATTGATTCAAAGGTGGGATGCAGAATTTTTCAACCAGATGTCTGAGACACTACATCATCGACTTCAATATAGAAGCGCTCGAGCTAGGGAAGTTTTAACCCACTATCGACTCGATGATGATCGTATACGAGAAAACGCATCTATTTAA 1512 0.4425 MMDHSPTISSSSSDFASIPTTDQNAARSMRSGDGSEIVTADQSRRWHDVFWLGIFVIHLIALGFLLGVLGLNRFEKENRLNIDRYTPGLSGNAAAGLTETYWPLYAVAGGIGTVLGWSWMLLLGSRATQMMKVSVHILTTYLAVISVLCFWTEQFFWGVAFAIGAALQFLYVISVIDRLPFTMLVLQKAVKMVWNLPEVMRVSYAFMFVVLLWMVLWSFGAAGVVASNLSDGGRWWLLVVFSVSLFWTGAVLCNTVHVIVSGMVFLVLSHGGREAASIPANSLMKSLQYALTTSFGSICYGSLFTAAIRTLRWEIRGLRSKIGNNECLLCCVDFLFHLVETLVRFFNKYAYVQIAVNGKSFNHSARDAWELFQSTGVEALVAYDCSGAVLLMGTIFGGLITGTCSGVWAWIKWSDRVIMIGSTSMLMGMVLVGLAMVVVESAVTSIYICYAEDPLLIQRWDAEFFNQMSETLHHRLQYRSARAREVLTHYRLDDDRIRENASI 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01590 503 PANTHER PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN 28 496 - -
Car04g01590 503 Pfam Plasma-membrane choline transporter 160 454 IPR007603 GO:0022857|GO:0055085
Car04g01590 503 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 28 496 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01590 Car-Chr4 16396702 16399730 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01590 04 16396702 16399730 Car04g01590 04 16396702 16399730 ECH