Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01589 ATGGCAGATAACACTCAAAACACTGAAGATACTTCAACAACAGATATTGATGATAAAAACAACAATCAATGTTTCTCGACCGTGTCTTGGTGCAATGGTGTTGAGAATGGAAACCTTGTAGTTGTTGATTCCAAGGATCAATGTAAGACTAAGGATAATAATGCTGAAGAGCACAAGTCTCTACGTAGGTTAGCGCAGAATCGCGAGGCTGCAAGGAAAAGTCGCTTAAGGAAAAAGGCATATGTGCAACAATTGGAGAATAGTCGAGTTAGGCTTGCTCAAATAGAGCAAGAGCTTCAACAAGTACGTCAACAGGGTGTGTTTGTTGCGTCCGGAGTTACAGGAGATCATGGTCATTCAGTGGTTGGAAATGGTAATTCAGGCACGTTCGCATTCGATATGGACTATGCGCGTTGGGTTGATGAGAATCAACGACTAATCAATGACATACGATCAGCTTTAAATTCACAAACGGGAGATAATGAACTGCATCTCCTTGTAGATGGTGTCATGGCACATTATGATGAATTATACAGGTTGAAGAGCATAGGAGCAAAGGCTGATGTATTTCACATACTTTCCGGTTTATGGAAAACACCTGCAGAAAGATGTTTCATGTGGCTTGGTGGATTCCGATGGTCCGAACTTCTCAAGATAGTTAGAAACCACGTTGAGGCGTTAACAGATCAGCAGTTGATAGGGATATACAATCTGCAGCATTCTTCTCAGCAGGCTGAGGATGCATTATCTCAAGGAATGGAAGCATTGCAACAATCTCTTTCTGAGACACTTTCTTCCAATGCATCTGGAGATGTTGCTGAGTACATGGGCCAAATGGCTATGGCAATGGCCAAGCTTTCAACACTAGAAACTTTCCTTCATCAGGCTGACTTATTGAGGCAACAAACACTGCAACAGCTGCGTCGAATTTTGACCGCGCACCAAGCTGCTCGTGCTCTCCTCGTCATAAATGATTTCATTTCGCGAATTCGAGCACTTAATTCATTATGGTTAGCATGTCCTAAAGAATACTAG 1035 0.4242 MADNTQNTEDTSTTDIDDKNNNQCFSTVSWCNGVENGNLVVVDSKDQCKTKDNNAEEHKSLRRLAQNREAARKSRLRKKAYVQQLENSRVRLAQIEQELQQVRQQGVFVASGVTGDHGHSVVGNGNSGTFAFDMDYARWVDENQRLINDIRSALNSQTGDNELHLLVDGVMAHYDELYRLKSIGAKADVFHILSGLWKTPAERCFMWLGGFRWSELLKIVRNHVEALTDQQLIGIYNLQHSSQQAEDALSQGMEALQQSLSETLSSNASGDVAEYMGQMAMAMAKLSTLETFLHQADLLRQQTLQQLRRILTAHQAARALLVINDFISRIRALNSLWLACPKEY 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01589 344 SMART brlzneu 55 111 IPR004827 GO:0003700|GO:0006355
Car04g01589 344 Coils Coil 78 105 - -
Car04g01589 344 CDD bZIP_HBP1b-like 59 111 - -
Car04g01589 344 Pfam bZIP transcription factor 56 97 IPR004827 GO:0003700|GO:0006355
Car04g01589 344 ProSiteProfiles DOG1 domain profile. 129 340 IPR025422 GO:0006351|GO:0043565
Car04g01589 344 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 57 101 IPR004827 GO:0003700|GO:0006355
Car04g01589 344 Gene3D - 59 106 - -
Car04g01589 344 PANTHER TRANSCRIPTION FACTOR TGA9 1 343 - -
Car04g01589 344 SUPERFAMILY Leucine zipper domain 59 101 IPR046347 GO:0003700|GO:0006355
Car04g01589 344 Pfam Seed dormancy control 147 221 IPR025422 GO:0006351|GO:0043565
Car04g01589 344 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 62 77 IPR004827 GO:0003700|GO:0006355
Car04g01589 344 PANTHER TRANSCRIPTION FACTOR PERIANTHIA 1 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01589 Car-Chr4 16391063 16393742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01589 32 343 bZIP Transcription Factor Family AT1G68640 68.139 2.53e-143 411
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Car04g01589 DOG1 3.3e-28 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01589 04 16391063 16393742 Car04g01589 04 16391063 16393742 ECH