Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01586 ATGCCCTCAACAAGAACTGGTTCATTCAGACACAGTTTCCTTGAAAAATCCAAAGAGAGACTCCTCGCTAAAAAAGAATACCCTGATTTCGCGTTCAACGATCCCCTCGATGAAGATGAAGATGCCGCCCCCAAAAACTGTTTCAATCTCGACGCGCTCTCTGATCGCGTCTCCAACATTCGCAATGCTACAACAGACTTCATCGCTAAATTATATGAGATGGGTCGTTCGGATCGACGCAAAGTGGTCTTTGCTATGAAAGCTGGTTTATCTTTGGCTCTTGTTTCTCTTTTTATATATATTAAGGAAGAACAACTCAGCAAGTACTCTATTTGGGCTATTCTCACTGTTGTTGTTGTTTTCGAATTCAGCATAGTAGGTGCAACACTTAACAAAGGGTTCAATCGTGCTTTGGGAACAATTTCAGCTGGAGTGCTTGCTCTTGGGATTGCACGACTATCCGTTTTGGTTGGTGGAGCTTTTGAGGAGCTTCTTATTGTTGTAGCTATTTTTATTGCAGGGTTCTGTGCAAGTTTTGTGAAGCTGTATCCTGCAATGAAGCCTTATGAATATGGATTTCGTGTATTCTTGTTAACGTTTTGTATTGTGTTGGTGTCTGGGAGACATGGAATGCAGTTTTTCACCACTGCTTTTTACAGATTGGTACTTATTGGTGTTGGTGCTGGTGTGAGTTTGTCTGTGAATATTTGCATTTACCCCATTTGGTCTGGAGAGGATCTCCACAAATTGGTGGTAAAAAATTTCCATGGAGTTGCTGGATCTTTAGAAGGTTGTGTAAATGGATACCTACAATGTGTTGAATATGAGAGGGTCCCATCTAAAATTCTTGTTTATCAAGCCTCTGATGACCCTCTGTACCGTGGCTATAGAACAGCAGTGCAATCGTCAACCCAAGAGGAAACTTTGGTAGATTTTGCATTATGGGAGCCACCTCATGGTCCATACAAGATGTTCAATTATCCTTGGAGAAGCTATGTCAAAGTTAGTGGAGCATTGAGACATTGTGCTTTCATGGTCATGGCAATGCATGGATGCATACTTTCAGAAATACAGGCACCTCCAGAAAAAAGGTTGGTATTCTCTGAACAACTTCAGAAGGTTGGTGCTGAAGGAGCTAAAGTATTACGTCAACTAGGAAGCAAAGTGGAAAAAATGGAGAAGCTAAGCACAAGAGACATTCTATTAGAAGTTCATGAGGCAGCTGAGCTATTGCAGATGAAGATTGACAGTCATTCTTTCCTTTTAGTCAATTCAGAGAATTGGGAAGCTGTAAGACGACAACAAGCTAAAGAAAATGGACAACCCGACATCGAGGTTAAAGACAACGAGAACAAACTGTCCACAATCAATGAACCCGTGGATGAATCAAAACTTAATATAAGCATACAACAATCGATGGCAGAATCGAGTTTTGCACAATCCATGAACAAAGGCTTAGTATCATGGCCTCACCTCTCTTTTTGCACCGATGCAATAGTAAATGAGCCGGAATCTAAAGTATATGAGAGTGCTAGCTCATTGTCTTTGGCTACATTTGCGTCGCTTTTAATCGAGTTTGTTGCTAGACTTCAAAATCTTGTGGATGAATTCCAAGATCTTAGTGAGAAGGCTAATTTTAAAGATCCCTTTGATCAACCTATGCTGAAATCCAAATTCCTCATTAATTACGTATCTTTACCTCTCTTAATCGTAACAAATCAACACTTTCACGCGATATATTGGCAACAAAACAAAATGTCTATGGCCGATGAACCACTGTATCCAATAGCCGTGCTTATAGACGAGCTGAAAAACGATGACATCCAACTGCGGTTGAACTCAATTCGTAGGCTATCAACGATTGCACGGGCTCTTGGGGAGGAGCGAACCCGTAGAGAATTAATTCCATTTTTGACTGAAAATAACGATGATGATGATGAGGTACTTCTTGCAATGGCGGAAGAGTTGGGAGTTTTTATTCCTTATGTTGGGGGAGTGGAACATGCCAACGCGTTGCTTCCGCCTCTGGAGGCATTTTGCAGTGTTGAGGAAACTTGTGTGAGGGATAAAGCTGTTGAGTCACTTTGTCGAATTGGATCTCAAATGAGAGAAAGTGATTTGGTTGAATATTTTATCCCATTGGTGAAGAGATTGGCAGCAGGTGAATGGTTTACTGCCCGAGTCTCTGCATGTGGACTATTCCATATTGCATACCCAAGTGCACCAGAAACATCAAAGACAGAGTTGAGATCAATATACAGTCAGTTATGTCAGGATGACATGCCTATGGTTAGAAGATCTGCTGCAACAAATCTTGGGAAATTTGCTGCAACTGTTGAGTATGCTCATTTGAAGGCTGATATCATGTCTATTTTTGACGATCTTACTCAGGATGATCAAGATTCTGTCCGATTGTTGGCTGTGGAGGGCTGTGCTGCTCTTGGAAAACTGTTGGAGCCACAAGATTGTGTTGCACATATACTCCCAGTTATTGTTAATTTCTCCCAGgataagtcttggcgtgtgcgatacatggttgcaaatcaattgtatgagctctgtgaagctgtagggcctgaacctaccagAGcggaattggttcctgcttatgttcgactgcttcgagataatgaggctgaggtacgcatagcagctgctgggaaagtgaccaagttttgccggattttaagtccagatcttgcgattcagcatattcttccttgtgTAAAGGAATTGTCATCAGATTCTTCACAGCATGTCCGCTCTGCTCTGGCTTCAGTAATAATGGGAATGGCTCCAGTGTTAGGAAAGGAAGCAACAATTGAGCAGCTTCTTCCTATTTTCCTTTCCCTTCTGAAGGATGAATTTCCTGATGTGCGCCTAAACATCATCAGCAAGCTTGATCAAGTGAATCAGGTTATTGGAATCGATCTGTTATCTCAATCTTTATTACCAGCAATTGTTGAGCTTGCAGAGGATAGACATTGGAGGGTTCGGCTTGCAATTATCGAGTATATACCCTTGTTGGCGAGTCAATTGGGGGTTGGATTTTTTGATGACAAACTGGGTGCACTTTGCATGCAGTGGTTACAGGATAAGGTTCATTCAATTCGTGAAGCAGCTGCTAATAACTTGAAACGTCTAGCTGAAGAGTTTGGTCCTGAGTGGGCTATGCAGCACATAATTCCTCAGGTTTTGGAGATGATTAACAATCCACACTATTTGTATCGGATGACCATTCTACGCGCTATCTCCCTGCTAGCTCCTGTAATGGGCGCTGAAATCACTTGTTCAAAATTATTGCCTGCTGTTGTTGCAGCATCAAAAGACAGAGTGCCAAACATAAAGTTCAATGTGGCAAAGGTATTAGAGTCCATCTTCCCCATCGTTGATCAGTCTGTGGTAGAAAAGACTATCCGACCATGTCTGGTTGAGCTCAGTGAGGATCCTGATGTTGACGTGCGGTTTTTTTCCAACCAAGCCCTGCAGGCAATTGATTATGTCATGATGGCTAGCTAG 3519 0.393 MPSTRTGSFRHSFLEKSKERLLAKKEYPDFAFNDPLDEDEDAAPKNCFNLDALSDRVSNIRNATTDFIAKLYEMGRSDRRKVVFAMKAGLSLALVSLFIYIKEEQLSKYSIWAILTVVVVFEFSIVGATLNKGFNRALGTISAGVLALGIARLSVLVGGAFEELLIVVAIFIAGFCASFVKLYPAMKPYEYGFRVFLLTFCIVLVSGRHGMQFFTTAFYRLVLIGVGAGVSLSVNICIYPIWSGEDLHKLVVKNFHGVAGSLEGCVNGYLQCVEYERVPSKILVYQASDDPLYRGYRTAVQSSTQEETLVDFALWEPPHGPYKMFNYPWRSYVKVSGALRHCAFMVMAMHGCILSEIQAPPEKRLVFSEQLQKVGAEGAKVLRQLGSKVEKMEKLSTRDILLEVHEAAELLQMKIDSHSFLLVNSENWEAVRRQQAKENGQPDIEVKDNENKLSTINEPVDESKLNISIQQSMAESSFAQSMNKGLVSWPHLSFCTDAIVNEPESKVYESASSLSLATFASLLIEFVARLQNLVDEFQDLSEKANFKDPFDQPMLKSKFLINYVSLPLLIVTNQHFHAIYWQQNKMSMADEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRRELIPFLTENNDDDDEVLLAMAEELGVFIPYVGGVEHANALLPPLEAFCSVEETCVRDKAVESLCRIGSQMRESDLVEYFIPLVKRLAAGEWFTARVSACGLFHIAYPSAPETSKTELRSIYSQLCQDDMPMVRRSAATNLGKFAATVEYAHLKADIMSIFDDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVAHILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRAELVPAYVRLLRDNEAEVRIAAAGKVTKFCRILSPDLAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKEATIEQLLPIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEYIPLLASQLGVGFFDDKLGALCMQWLQDKVHSIREAAANNLKRLAEEFGPEWAMQHIIPQVLEMINNPHYLYRMTILRAISLLAPVMGAEITCSKLLPAVVAASKDRVPNIKFNVAKVLESIFPIVDQSVVEKTIRPCLVELSEDPDVDVRFFSNQALQAIDYVMMAS 1172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01586 1172 ProSiteProfiles HEAT repeat profile. 788 826 IPR021133 -
Car04g01586 1172 ProSiteProfiles HEAT repeat profile. 595 633 IPR021133 -
Car04g01586 1172 ProSiteProfiles HEAT repeat profile. 1100 1138 IPR021133 -
Car04g01586 1172 ProSiteProfiles HEAT repeat profile. 1139 1172 IPR021133 -
Car04g01586 1172 ProSiteProfiles HEAT repeat profile. 1061 1099 IPR021133 -
Car04g01586 1172 PANTHER PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT A, PUTATIVE-RELATED 586 1172 - -
Car04g01586 1172 ProSiteProfiles HEAT repeat profile. 866 904 IPR021133 -
Car04g01586 1172 Gene3D - 587 1168 IPR011989 -
Car04g01586 1172 ProSiteProfiles HEAT repeat profile. 1022 1060 IPR021133 -
Car04g01586 1172 ProSiteProfiles HEAT repeat profile. 905 943 IPR021133 -
Car04g01586 1172 Pfam Aluminium activated malate transporter 73 541 IPR020966 GO:0015743
Car04g01586 1172 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT 586 1172 - -
Car04g01586 1172 Pfam HEAT repeat 827 855 IPR000357 GO:0005515
Car04g01586 1172 ProSiteProfiles HEAT repeat profile. 944 982 IPR021133 -
Car04g01586 1172 ProSiteProfiles HEAT repeat profile. 749 787 IPR021133 -
Car04g01586 1172 Pfam HEAT repeats 946 1046 - -
Car04g01586 1172 ProSiteProfiles HEAT repeat profile. 827 865 IPR021133 -
Car04g01586 1172 Coils Coil 523 543 - -
Car04g01586 1172 ProSiteProfiles HEAT repeat profile. 983 1021 IPR021133 -
Car04g01586 1172 SUPERFAMILY ARM repeat 593 1165 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01586 Car-Chr4 16367381 16380161 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01586 15 548 Miscellaneous Gene Families AT1G25480 61.413 0.0 647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01586 04 16367381 16380161 Car04g01586 04 16367381 16380161 ECH