Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01583 ATGGCCACCGATGGTCACGATTCTCGACGCAAGCATCACCGATCATCCTCTCCGGAAGACCTAGACAAATCCTCCAAGcgtcacaagcaccgccaccatcaccgccatcgtcacGGAACCAAAAGACGTGATGAAGAGATTCATCACGATGCCGGAATAGTTGCCACGATTCCTTCTCCAAGTCCTCCTCCTATTCTCGCTCCGCACAGCCATCTCCCTGACGATGACGTCGAGGAGGGAGAGATTCTCGATGACGAGACTTTCGACGGTGTGGTTGGAAAGAAACAATTGGAATCCGATGCTGAACCTGGTGAAATTGAGGTGAAAGCAGATCGAGATCTTCGATCTGATAAGAAAATTCCGGGACTTCCCACTAAAAGTTCGAAAACTGAAAGCGAGGGCTTCAGCAATGATAAATTTAGTAGCCCTACTTCTGATGCAGAAGATGGGAAATGGCGTCAGAGCCACATTGATTCTCGAATTCATGAAGATGATGATTCTTCAAACCACTCTAGAGCTGAAACTCATGCTAGGAGGGATGTTCGAGCTGGTACTGATGATTTGGGCAATGGGTATTTGAACGTCAAGTCTTCCAAAGGCAATGAGTGGCAGAATGGGGAAGTTGGGCATTTTAAAGGAAAAGAGAAACTAAAAGGTGACTATGATGGTGAATCACTGGAGGCTAATAGAAGGGAAGTAAATTACCACAGACAATCCTCCTCTGAAATTGGAGAAGAAAAACGTAGACTGTCAGGAAATTCTCCTTCTCGTGATGGATACAGAAGTCGATCAAGATCAGCTGGTCATGCAAGGGATAGGTCTCGTTCTCGTAGTGTAGTAGAAGAGTATGCTCATCCTAAGAGAAGGCACTCTAGGGATCAAGGATCCCTTTATTATACTAGCAGACACAAGAATGATTATGACCTTGACGAGGAAAGACATCGTCATGGCAGTAAAGACCTGGTGGAAGATGAGAGACAGGAACACAGTACTAGGTATCACAGTAGGGAGTCCCggcatagggatagggaaaacgataggagtagggacaggtatgtggatagagaCTTACGCAGGGAAAAGAAGCGAGAGGAAACAAGCAGCAATAAGGAGGTTGATTGGGAGCGTAAAAGGGAAAAAGAACGTGGAAGGAGCCATGAGAGGCATAGAAGGGACATGGAAAAAGATAGGAGCAGGGAAAGGGACGAGGGCAGGGATAGGAGAAGAGAAAAGCAAAGAGATAGAAGCAGGGACATGGTTTATGAAAGGGATAGGAGAAGGGAAATGGAACGAGATGTGAGCAGAGACAGAACAAGGGGTGGTGAGAGAGATAGAGACTGGAAGCGTGAATGGGATTATAGGAATCAGGAAAGGGATAACATTAAGGAGAGGGAGAGACGAGATGATAGATATCGCCACAAAGATAAAGAAGCCCCTAATGGTAAGGATAAGCATATGCGGCGTGAGGATGGTAATGACAGTGGAGATAGATATAAAAAACATTCAAGTCTTGAAGAAAACGGATACCATGCAGATAGAAAGAGAAACTATACCATTGAAGAGGATGAAAGGAAACTAAAAGGCCGTGAGGTTGAACAAGATGATGTATATGAGGATACATTGCAATTACCTGAACAagaagaggaagatctgaacagaatcaaagaggagagtagaaggagaagagaagCAATATTGGAAAAATACAAGAAGCAGAATCAGCAAATAGAACAAAAGGTTCGAAATGATGGAAAAGACAAGGATGTGGACACTCCTACTGACATTTCTAAAGCAAatgatggtaagagtgatgatgttgatgatgTGGAATCATCATTCGCCGTTGGTAAGTCTCCACCAGAAAACGAGGATGTTGGCTCAGAAAAGTTACCTGGTGCAGGGGGCCTAGGCGAGGGTACTCCAAAGAGTGAGAGGTCAGTTGACAAGTATTGTGATGATATATTTGGTGAGACACCAACAGGAGTTCGGAAAAGGGGTAAAGGAGATGGATTACTGATTGAGAGGGTTAGCCTGCATGACAATTGGGATGATGCAGAGGGCTATTATAGCTATCGTTTTGGTGAAATACTTGATGGCCGATATGAAGTTGCTGCTGCACACGGGAAGGGTGTCTTTTCAACGGTTGTACGAGCAAAAAATCTAAAAACTGGTAATGGTGAGCCGGATGAAGTAGCAATAAAAATTATTCGCAATAACGACACCATGTACAAGGCTGGTTTGGATGAATTGATCATTTTAAAGAAATTAGTAGGTGCAGATCCGGATGATAAACGTCACTGTGTTCGTTTCCTTTCAAGCTTTAAGTACAGAAATCATCTATGTTTAGTTTTTGAATCTCTAAATATGAATCTGCGTGAGGTTTTAAAGAAGTTTGGTCGCAATATTGGCCTTAAGCTAACTGCTGTGAGGGCATATGCAAAACAGCTTTTTATTGCACTGAAGCATCTCCGTAACTGTGGTGTTCTGCACTGTGATATAAAGCCCGATAATATGTTGGTGAATGAGGCTAAAAATGTTTTGAAGCTTTGTGACTTTGGTAATGCCATGTTTGCTGGTAAAAATGAAGTAACACCATATCTCGTGAGTCGCTTTTATCGTGCACCTGAAATAATTCTTGGTTTGCAGTATGATCATCCATTGGATATTTGGTCTGTAGGCTGTTGTTTGTATGAATTATATACAGGGAAGGTTCTTTTTCCAGGGCTCACAAACAATGACATGCTGCGGCTTCACATGGAATTGAAGGGTCCTTTTCCAAAAAAGATGCTTCGTAGGGGAGCATTTACTGAACAACACTTTGACCAGGACCTGAGTTTTCATGCTACCGAGGAGGATCCTGTAACAAAAAAAACCATAAAGCGGATGATTCTCAACATAAAGCCGAAAGATATTGCAACAATCATCACCGGCTCTCCTGGGGAGGATCCAAAAATGTTGGCCAATTTCAAAGATCTTCTTGATAAAATTTTCATCTTGGATCCGGACAAGAGGCCTACACTTAACTGGCGGTTCTCAGTGGAATGTACTGTTTCTATTGAGACACCAGGGGTTTGA 3075 0.4065 MATDGHDSRRKHHRSSSPEDLDKSSKRHKHRHHHRHRHGTKRRDEEIHHDAGIVATIPSPSPPPILAPHSHLPDDDVEEGEILDDETFDGVVGKKQLESDAEPGEIEVKADRDLRSDKKIPGLPTKSSKTESEGFSNDKFSSPTSDAEDGKWRQSHIDSRIHEDDDSSNHSRAETHARRDVRAGTDDLGNGYLNVKSSKGNEWQNGEVGHFKGKEKLKGDYDGESLEANRREVNYHRQSSSEIGEEKRRLSGNSPSRDGYRSRSRSAGHARDRSRSRSVVEEYAHPKRRHSRDQGSLYYTSRHKNDYDLDEERHRHGSKDLVEDERQEHSTRYHSRESRHRDRENDRSRDRYVDRDLRREKKREETSSNKEVDWERKREKERGRSHERHRRDMEKDRSRERDEGRDRRREKQRDRSRDMVYERDRRREMERDVSRDRTRGGERDRDWKREWDYRNQERDNIKERERRDDRYRHKDKEAPNGKDKHMRREDGNDSGDRYKKHSSLEENGYHADRKRNYTIEEDERKLKGREVEQDDVYEDTLQLPEQEEEDLNRIKEESRRRREAILEKYKKQNQQIEQKVRNDGKDKDVDTPTDISKANDGKSDDVDDVESSFAVGKSPPENEDVGSEKLPGAGGLGEGTPKSERSVDKYCDDIFGETPTGVRKRGKGDGLLIERVSLHDNWDDAEGYYSYRFGEILDGRYEVAAAHGKGVFSTVVRAKNLKTGNGEPDEVAIKIIRNNDTMYKAGLDELIILKKLVGADPDDKRHCVRFLSSFKYRNHLCLVFESLNMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLRNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAMFAGKNEVTPYLVSRFYRAPEIILGLQYDHPLDIWSVGCCLYELYTGKVLFPGLTNNDMLRLHMELKGPFPKKMLRRGAFTEQHFDQDLSFHATEEDPVTKKTIKRMILNIKPKDIATIITGSPGEDPKMLANFKDLLDKIFILDPDKRPTLNWRFSVECTVSIETPGV 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01583 1024 PANTHER DUAL SPECIFICITY PROTEIN KINASE 377 1008 - -
Car04g01583 1024 SUPERFAMILY Protein kinase-like (PK-like) 688 1008 IPR011009 -
Car04g01583 1024 Coils Coil 555 586 - -
Car04g01583 1024 Gene3D Phosphorylase Kinase; domain 1 671 760 - -
Car04g01583 1024 Pfam Protein kinase domain 705 1007 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01583 1024 MobiDBLite consensus disorder prediction 1 25 - -
Car04g01583 1024 Gene3D Transferase(Phosphotransferase) domain 1 761 1010 - -
Car04g01583 1024 MobiDBLite consensus disorder prediction 262 445 - -
Car04g01583 1024 MobiDBLite consensus disorder prediction 462 536 - -
Car04g01583 1024 MobiDBLite consensus disorder prediction 87 124 - -
Car04g01583 1024 SMART serkin_6 701 1019 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01583 1024 ProSiteProfiles Protein kinase domain profile. 701 1017 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01583 1024 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 377 1008 - -
Car04g01583 1024 MobiDBLite consensus disorder prediction 125 143 - -
Car04g01583 1024 MobiDBLite consensus disorder prediction 1 445 - -
Car04g01583 1024 MobiDBLite consensus disorder prediction 546 611 - -
Car04g01583 1024 MobiDBLite consensus disorder prediction 462 648 - -
Car04g01583 1024 MobiDBLite consensus disorder prediction 144 185 - -
Car04g01583 1024 MobiDBLite consensus disorder prediction 26 42 - -
Car04g01583 1024 MobiDBLite consensus disorder prediction 208 254 - -
Car04g01583 1024 CDD STKc_PRP4 700 1008 IPR044092 GO:0004674|GO:0006468|GO:0045292
Car04g01583 1024 ProSitePatterns Serine/Threonine protein kinases active-site signature. 828 840 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01583 Car-Chr4 16328954 16336652 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01583 708 1008 Core Cell Cycle Gene Families AT1G66750 29.808 5.54e-24 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Car04g01583 Pkinase 6.5e-44 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01583 04 16328954 16336652 Car04g01583 04 16328954 16336652 ECH