Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01568 ATGAAAGTGAGTTGCAATGGATGTCGCGTACTTCGCAAAGGCTGTGGTGAAAATTGTATCATCAAGCCTTGTCTTGAGTGGATCAGTTCCCCTGAGTCCCAAGCCAATGCCACTGTCTTCCTTGCCAAGTTCTACGGCCGCACTGGCTTGCTCAACCTCCTCGCCGCTGCTACTCGACAAAATGCCCCAGTTGTGTTCAGATCCTTATTGTACGAGGCTTCGGGCAGAATGGTGAATCCCACTTTTGGGGCACTAGGTTTATTCTGGCAAGGAGAGTGGAGCCGATGTGAAGCTGCAGTTGAAGCTGTGCTATCTGGCTCAAGAATTAATGACGTGGCAACCGTTGATTTGAATACCTCAAGTACACTCGTTGGTGATCATGTTCTTCAAACATATGATATACGACACGTGGCTAGAGGTTCCAACATTGGAATTAAAGGAAAAACTCAATTCAAGAGAGTCGGAGAAGTTTTCAAACCCAAACCGCGTCTAGGTTCGGTCAGCTCAACTGCATTGTTGACATCAGGTTGGGATACGGCATGTACCGAACCTGGGGAGGCTTCTTCGGTAATTCAGACTGAGCCCAAGGAAATCGTTGAAACACAAGTGAATTTGGAACTCACTCTTGGCTTTCATTGCCAATAA 645 0.4713 MKVSCNGCRVLRKGCGENCIIKPCLEWISSPESQANATVFLAKFYGRTGLLNLLAAATRQNAPVVFRSLLYEASGRMVNPTFGALGLFWQGEWSRCEAAVEAVLSGSRINDVATVDLNTSSTLVGDHVLQTYDIRHVARGSNIGIKGKTQFKRVGEVFKPKPRLGSVSSTALLTSGWDTACTEPGEASSVIQTEPKEIVETQVNLELTLGFHCQ 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01568 214 PANTHER LOB DOMAIN PROTEIN 1 214 - -
Car04g01568 214 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
Car04g01568 214 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 214 - -
Car04g01568 214 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01568 Car-Chr4 16130874 16131946 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01568 1 211 AS2 family AT3G02550 43.721 5.25e-57 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Car04g01568 LOB 2.5e-20 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01568 04 16130874 16131946 Car04g01568 04 16130874 16131946 ECH
Car04g01568 04 16130874 16131946 Car02g00371 02 4131885 4133565 ECH
Car04g01568 04 16130874 16131946 Car03g00062 03 1539217 1542205 ECH