Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01561 ATGCCTTCATTTCTCTCACACCACTCTCAACCTTCTTATTATTATCATCATCAACCTATCAAATTTCATCACTCTTCTCTCACCCTTTTCATTCcctcttcatcctcctcctcctcctccCGTACAAAGCCCCGCTGGCCTCGAATGGACAGCGCCGCCTCCCGCCACCGCCGGAAAGACAAGGTGGTAGTTATCATGGGCGCCACCGGCTCCGGAAAATCTCGTCTTTCCGTTGAACTCGCAACCCTCTTCCCCTTCTCAGAAATAATAAACTCCGATAAAATGCAAGTTTACAGAGGACTCGACATTACCACCAACAAGATCCCCTTTCATCAACGCAACGGCGTCCCACATCATCTTCTCGGCGACGTCGACCATTCCCACGGTGAGTTTTCCCCTTCAGATTTCCGCCGTCATGCCGGAGAAATAATCTCCGATATAACCTCCCGGAGAAAGCTTCCCATTATCGTCGGTGGGTCCAACTCATTCATTCACGCTCTTCTCGTAGAACGATTCGACCCCGAGTTAAACGTGTTCGATAAatcttcatcttcatcatcatcgtcgctatcgtcaatatcgtcGGATTTAAGGTACAAATGTTGCTTTCTCTGGATGGATATATCGTTTCCTGTGTTATCGGAATATTTATTGAAGCGAGTCGACGAAATGTTCGACTCGGGAATGGTGGACGAGTTGGCCCAGTTTTTCGAACCGGATTCGGAAAACCGAACCGGGTTGAGAAAAGCAATCGGAGTGCCAGAGTTCGACCGTTTTTTTAATAAGTATCCACCGGCGGATAAATTAGAGGAAGGTGAAAATCCGATGCGAGAAGGTGCATACGAGGAAGCAGTGAGGGCGATTAAAGATAACACATGTCAGTTAGCCAAGAGGCAGATTGGAAAGATCCTACGGTTAAAAAGAGCTGGGTGGGACCTACGGAGAATAGATGCCACGGAGGCTTTTAGGGCGGTGCTGACGTCAGAGTCTCGCGGCGGCGCCGGCGTATTTTCCGATTTATGGAAAAATCAAGTGTTGGAACCAAGCGTGAAGATTGTGAAGCGGTTCTTGATGGAGTAG 1080 0.4537 MPSFLSHHSQPSYYYHHQPIKFHHSSLTLFIPSSSSSSSSRTKPRWPRMDSAASRHRRKDKVVVIMGATGSGKSRLSVELATLFPFSEIINSDKMQVYRGLDITTNKIPFHQRNGVPHHLLGDVDHSHGEFSPSDFRRHAGEIISDITSRRKLPIIVGGSNSFIHALLVERFDPELNVFDKSSSSSSSSLSSISSDLRYKCCFLWMDISFPVLSEYLLKRVDEMFDSGMVDELAQFFEPDSENRTGLRKAIGVPEFDRFFNKYPPADKLEEGENPMREGAYEEAVRAIKDNTCQLAKRQIGKILRLKRAGWDLRRIDATEAFRAVLTSESRGGAGVFSDLWKNQVLEPSVKIVKRFLME 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01561 359 MobiDBLite consensus disorder prediction 33 57 - -
Car04g01561 359 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 240 IPR027417 -
Car04g01561 359 Pfam IPP transferase 96 170 - -
Car04g01561 359 Pfam IPP transferase 178 300 - -
Car04g01561 359 Gene3D - 59 357 IPR027417 -
Car04g01561 359 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 210 313 - -
Car04g01561 359 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 4-RELATED 51 358 - -
Car04g01561 359 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 51 358 IPR039657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01561 Car-Chr4 15988693 15990345 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01561 198 357 C2H2 Transcription Factor Family AT2G27760 30.220 2.00e-15 75.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01561 04 15988693 15990345 Car04g01561 04 15988693 15990345 ECH