Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01542 ATGGCCTCTGGTGAAGGGAGGCAGCATCATCATCGTGATCTTGTGCCTCTTGCTGCGTTACTTAAGAGAGAGATGAAGAGTGAAAAGATGGAGAAGCCTAATGTGAGGATTGGTCAAGCTGCTCAGTCTAAGAAAGGAGAGGATTACTTCCTAATTAAGACCGACTGTCAGCGTGTGCCCGGGAACTCTTCAACATCCTTTTCTGTATTTGCGATCTATGATGGACACAATGGAAATGCTGCAGCCATTTTTACTAAGGAAAATTTGTTAAATCACGTGCTGTGTGCTCTTCATCGAGGGCTTGGGCGAGAGGAGTGGTTGCAAGCTTTACCTAGAGCTTTGGTTGCTGGTTTTGTTAAGACTGATAAGGAATTTCAGAGCAGAGGAGAAACTTCTGGAACCACAGCCACATTTGTGATAGTTGATCGGTGGACTGTGACTGTCGCATCTGTTGGAGATTCTCGTTGTATACTAGATACTCAGGGTGGTGCTGTTACCACCTTAACAGTTGATCACAGACTGGAAGAGAATATTGAAGAGAGGGAACGTGTTACAGCGAGTGGAGGTGAAGTTGGGAGGCTTAGCATTGTTGGTGGTGCCGAGATTGGTCCCCTTCGATGCTGGCCGGGAGGTCTATGCCTTTCTAGGTCAATAGGAGACATGGACGTTGGGGAGTTTATAGTTCCAATACCATATGTCAAACAAGTGAAGCTATCAAAAGCTGGTGGGAGGCTTATAATTGCTTCTGATGGCATATGGGATGCTCTATCATCAGAAATGGCTGCAAAATCTTGCCGTGGTTTGCCTGCCCAACTTGCTGCTATGCAGGTTGTCAAGGAAGCACTAAGAACAAGAGGGTTAAAGGATGATACAACATGCATAGTAGTTGACATAATCCCACCTGATAACGAATTGCCTTCAACACCTCCCCCAAGAAAGCGGAACAAGTTGATAGATTTTTTCTTCAGGAAGAAGTCTCGTGATTCTGCTGGTAAGCTCTCAAAGAAGCTTTCAGCTATAAATATAGTGGAAGAACTGTTTGAAGAAGGATCAGCAATGCTTGCTGAAAGATTAGGAAATGATGACAACACAGGTCAATCAACATCTGGCCTTTTTGTTTGTGCTGTATGTCAAGTTGATCTTGCTCCGAGTGAGGGCATATCCGTCCACGCAGGTTCAATTTTCTCGACTAGCTCGAAGCCCTGGCAAGGTCCTTTTCTATGTAGTGATTGTCGCGATAAGAAGGATGCAATGGAAGGAAAACGTCCTAGTGGAGTTAAAGTGTCATAA 1290 0.4488 MASGEGRQHHHRDLVPLAALLKREMKSEKMEKPNVRIGQAAQSKKGEDYFLIKTDCQRVPGNSSTSFSVFAIYDGHNGNAAAIFTKENLLNHVLCALHRGLGREEWLQALPRALVAGFVKTDKEFQSRGETSGTTATFVIVDRWTVTVASVGDSRCILDTQGGAVTTLTVDHRLEENIEERERVTASGGEVGRLSIVGGAEIGPLRCWPGGLCLSRSIGDMDVGEFIVPIPYVKQVKLSKAGGRLIIASDGIWDALSSEMAAKSCRGLPAQLAAMQVVKEALRTRGLKDDTTCIVVDIIPPDNELPSTPPPRKRNKLIDFFFRKKSRDSAGKLSKKLSAINIVEELFEEGSAMLAERLGNDDNTGQSTSGLFVCAVCQVDLAPSEGISVHAGSIFSTSSKPWQGPFLCSDCRDKKDAMEGKRPSGVKVS 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01542 429 Pfam Protein phosphatase 2C 62 281 IPR001932 -
Car04g01542 429 SUPERFAMILY PP2C-like 42 298 IPR036457 -
Car04g01542 429 ProSiteProfiles PPM-type phosphatase domain profile. 29 298 IPR001932 -
Car04g01542 429 Gene3D - 37 302 IPR036457 -
Car04g01542 429 PANTHER PROTEIN PHOSPHATASE 2C 15-RELATED 7 428 - -
Car04g01542 429 SMART PP2C_4 26 296 IPR001932 -
Car04g01542 429 CDD PP2Cc 44 298 IPR001932 -
Car04g01542 429 SMART PP2C_SIG_2 32 298 IPR001932 -
Car04g01542 429 PANTHER ALPHABET, ISOFORM E-RELATED 7 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01542 Car-Chr4 15760509 15764865 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01542 1 428 PP2C-type Phosphatase Gene Family AT1G68410 78.899 0.0 688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01542 04 15760509 15764865 Car04g01542 04 15760509 15764865 ECH