Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01540 ATGGCTCTAGTTTATGCACTACATCATGGGCTCTTTTTGTTCTCTCATGTATTTGTTCTATTGCTACTTGTCTTAACTAGGAAAGGAAATGCAAACCGTGATGATTGTCTAGACTCATTTGAATGTGGAAATCTTGGTTTCATTAAATACCCTTTTACAAAAGTTGGACTCCCTAAATGTGGTGTATTGCAAATTCAAGGTTGTGATGATCATAACAAAAATGCATCAAAGTACGTCCAGTTAACCAAAGGAGGAAAACTCTTTCAAGTTACAAATGTTGATACTAGCAGTTGGTCTACTGGCAACACTATTTCTATTATTGACCAAAATTTGACCAAGTTTTTGCAGAAAAATGCTTGTGAGGCCTTCAGTTATGACAATATTACCCTCCCTCCTCCCTCTCCTTTTGGACTCTTTTATATAAAAGACAACATAACTGTTGTCAAATGTACCAAAAAACTAGTCATCAAGTACCCTCCAAATAATTTCTTCAAAAATAGAACATGTCCTCACTATGATTTTTACTTTGGCGATTCAATATCCGATAGTGAGTCGAACCAATCTTTTGCGTCGTGTTCATTGTTTCATCTTCCTATCAATGAATTAGGCTTTGCACTTTCTGGTAATCCATTTCCTTACTTAGCTGATCAAATTACTTTTCAGTTTCAACCTTCGGATTTTTGTCGTAGGTGTCACCGCAATACAAAAGGTCATTGTGGCGCTGACAGCAACGGACAACCATATTGTTTCGTAAGGAAAAATAGAAGTTCAACTTGGAAGCTAGGATTGGTTTTAGGAGTTGGTGTTGGACCATGGATCATAGTTGGATTGTTCCTCACGTTACGGTACTACAAAAGGAAGTATGACCCTGCAGACGTCCAACCCCAATCAAGCAACGACATTTCTGCTGATCCCTTTTCCAATCGTGAAATAGAGAGAAACAAGCTCTTCTTTGAGCTACCCGTCTTCTCCTATGAAGAGCTTCAACAAGCAACAAACAATTTTGACATCACTAGAAAGCTAGGAGATGGAGGTTTTGGTACTGTTTATTACGGAAAACTCAAAGATGGAAGGGAGGTTGCTGTGAAACACTTATTTGAGCACAATTACAGGAGAGTAGAACAGTTTGTGAACGAAATCAAACTCCTAACTCGATTGCGCCACAGGAATCTAGTGTCCCTCTATGGCTGCACTTCGCGTCATAGCCGCGAGTTACTGCTTGTCTACGAATACATTCCAAATGGAACTATTGCTAGCCATCTCCATGGCAATTTAGCTAGAGCTAGCTTACTGACATGGCCTATTCGGATGCAAATCGCAATCGAAACTGCTTCTGCATTGGCTTATCTACATGCTTCTGACATCATTCACCGTGATGTCAAAACCAACAACATTTTACTTGACATTAATTTTTCAGTTAAGGTAGCAGATTTTGGTCTATCGAGGTTGTTCCCGAACGATGTTAGTCATGTCTCCACAGCTCCACAGGGAAGTCCGGGTTACCTTGATCCTGAATATTTCCAACTCTACAAGCTATCAGTCAAGAGTGATGTATATAGCTTCGGGGTTGTGCTTATTGAGTTAATATCATCCATGACAGCAATTGATGCTGCTAGGGAAAGNNNNNNNNNNNNNNNNNNNNNNGGAAAGAGAAGAAATTAA 1662 0.3905 MALVYALHHGLFLFSHVFVLLLLVLTRKGNANRDDCLDSFECGNLGFIKYPFTKVGLPKCGVLQIQGCDDHNKNASKYVQLTKGGKLFQVTNVDTSSWSTGNTISIIDQNLTKFLQKNACEAFSYDNITLPPPSPFGLFYIKDNITVVKCTKKLVIKYPPNNFFKNRTCPHYDFYFGDSISDSESNQSFASCSLFHLPINELGFALSGNPFPYLADQITFQFQPSDFCRRCHRNTKGHCGADSNGQPYCFVRKNRSSTWKLGLVLGVGVGPWIIVGLFLTLRYYKRKYDPADVQPQSSNDISADPFSNREIERNKLFFELPVFSYEELQQATNNFDITRKLGDGGFGTVYYGKLKDGREVAVKHLFEHNYRRVEQFVNEIKLLTRLRHRNLVSLYGCTSRHSRELLLVYEYIPNGTIASHLHGNLARASLLTWPIRMQIAIETASALAYLHASDIIHRDVKTNNILLDINFSVKVADFGLSRLFPNDVSHVSTAPQGSPGYLDPEYFQLYKLSVKSDVYSFGVVLIELISSMTAIDAAREXXXXXXXXGKRRN 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01540 553 ProSitePatterns Protein kinases ATP-binding region signature. 341 363 IPR017441 GO:0005524
Car04g01540 553 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 22 540 IPR044652 -
Car04g01540 553 Gene3D Transferase(Phosphotransferase) domain 1 412 547 - -
Car04g01540 553 Coils Coil 537 540 - -
Car04g01540 553 Pfam Protein tyrosine and serine/threonine kinase 337 531 IPR001245 GO:0004672|GO:0006468
Car04g01540 553 ProSiteProfiles Protein kinase domain profile. 335 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01540 553 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
Car04g01540 553 SUPERFAMILY Protein kinase-like (PK-like) 317 534 IPR011009 -
Car04g01540 553 Gene3D Phosphorylase Kinase; domain 1 307 411 - -
Car04g01540 553 PANTHER WALL-ASSOCIATED KINASE-LIKE PROTEIN 22 540 - -
Car04g01540 553 Coils Coil 549 553 - -
Car04g01540 553 SMART serkin_6 335 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01540 Car-Chr4 15737452 15740340 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01540 33 539 Receptor kinase-like Gene Family AT1G25390 46.899 2.48e-130 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Car04g01540 PK_Tyr_Ser-Thr 2.8e-46 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01540 04 15737452 15740340 Car04g01540 04 15737452 15740340 ECH