Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01539 ATGAGTTCAATTTATGAGTTTGTTATGTTGCTTTTGTTTTCACAAGTCATGTTGCTAGTTGTGTTGGTGAGTGGAGATGAGAATAAGTACGAAGAAGGAGAGTGTCCACCTTCATTTAGTTGTGGATATCTTGGCAATATCAGCTTCCCTTTCACTACAACTGAACACAAAGACTGTGGCTTATTGCCAATACAATATTGTCATGAATCTATGATGAAGCCCAAAGTGATCCAATATCAGTATAAAGGGATATTGTTTGAGTTTGAGGTTGAAGCTGTAATCCCTCCTTTGTTTCACGCTGGTGGTGGTAGTGTTTCTTCTACTTGTATTTTTAGAGACAAACAACTCTACAAATTACTTCAAGACAAAAATTGTGAAGCTTTCAGATATAATTTTACTTTTCCTCCAACCCCTGATCACTTTGTTTCTTTTAACCCCGATACTTATACGACCTTGTTCATGTGCAACCATACCCTTCATGTCAACCCTCCAAATTATATGCATAACTATACACACTGTTCTCATTACAATATCTACTACCAGCCTCACATCAGGGCTGATAATGCGTCTCGCAGTGCTTTTACAGCTTGTACAAATGTCAAGCTTCCGATTAAAGACCTCGCTGACTCTGACAACCCTTTTACTTTTGTGACTGCTGATATCTTAACTGAAGTGAAGATAACAGATGAATGTGCACATTGTCACTACATGCAAAGAGGATGTTGTCAACTTGACATCAATGGAAGGTTTTTTTGTGCCAATGGTACAATTATAGAGAAAAAGGGGCTGAGTCGGAATGTCAAACTGGGTGTAGGTTTGGGAATTGGAATCACAGGCATCTTGTTGTTTGGGTCGCTGTTTCTCCTTCTACTCTACAAACGAAAACATGCTATATCAGTTCGACACTTCCAATCTAATAACTCTTATTCTGATTCCTCGGTGAATCCACGCCGAGAATTTGGTAGCAAATACTTTGGAGTTCCAGTATTCTCCTACGAGGAGCTTCGAAAAGCAACAGACAATTTCGATCATACTAAAGAACTTGGAGATGGAGGCTTTGGTACTGTCTACTTTGGAAAGCTTCCAGATGGACGTGAAGTTGCTGTCAAGCGTTTATACGAACACAATTACAGGAGAGTACAACAGTTCATTAATGAAGTTAACATCCTCACTAATTTGCGGCACAAGAATCTCGTGTCCCTCTATGGCTGCACTTCGCGGCACAGCCGTGAACTACTGCTTGTGTATGAATATATCTCAAATGGCACCATTGCATGTCATCTTCATGGTGAATTGGCCAAACCCGACATACTACCATGGTCTATACGAATTAAAATCGCCATAGAAACTGCTACTGCCTTGGCTTATCTCCATGCTTCTGGTATCATTCACCGTGACGTGAAAACCAGcaacatactactcgacaacaatttttgtgttaaagtagcagattttggactttcaaggttattccctgaggatgtcactcatgtttccacagctccgcaagggactccgggttaccttgatccagaatatcaccaatgttaccaacttactagcaagagtgatgtatatagttttggagtTGTACTCATTGAGCTGATATCATCTAAGCCTGCAGTTGATATAAGCAGAAGTAGGGATGAGATTAACTTGTCAACTCTAGCAACAAAGAAGATTCAAGAGAGTGCAATTGGTGAGCTGGTGGATCCTTGTCTTGGTTTTGATGAAGACAATGAGGTAAATAGGATGATAGTTTCAGTGGCAGAATTGGCTTTTCAATGTTTGCAAAAGGACAAGGAGTTGAGGCCTTCTATGGAAGAAGTATTGGATGAACTTAGGAGAATAGAAAGTGGGAATGATGGGGTTGTGGTTGTAGAGGAGGCAGATATTGATGGTGTTGGATCTTCGCACAGTAATGTACATCCACCACCACCACCATCAGCCGCCTCGCCTGAATTGGACGACATTGGATTATTGAAGAATACGAAGCATATGTCATTAATGAAGAATATGAAGCATCCGTCTTCACCAAACACTGTCACTGATAAATGGGAAAGTATAAGTACTACGCCTAATGTCAGTGCTTAA 2094 0.3701 MSSIYEFVMLLLFSQVMLLVVLVSGDENKYEEGECPPSFSCGYLGNISFPFTTTEHKDCGLLPIQYCHESMMKPKVIQYQYKGILFEFEVEAVIPPLFHAGGGSVSSTCIFRDKQLYKLLQDKNCEAFRYNFTFPPTPDHFVSFNPDTYTTLFMCNHTLHVNPPNYMHNYTHCSHYNIYYQPHIRADNASRSAFTACTNVKLPIKDLADSDNPFTFVTADILTEVKITDECAHCHYMQRGCCQLDINGRFFCANGTIIEKKGLSRNVKLGVGLGIGITGILLFGSLFLLLLYKRKHAISVRHFQSNNSYSDSSVNPRREFGSKYFGVPVFSYEELRKATDNFDHTKELGDGGFGTVYFGKLPDGREVAVKRLYEHNYRRVQQFINEVNILTNLRHKNLVSLYGCTSRHSRELLLVYEYISNGTIACHLHGELAKPDILPWSIRIKIAIETATALAYLHASGIIHRDVKTSNILLDNNFCVKVADFGLSRLFPEDVTHVSTAPQGTPGYLDPEYHQCYQLTSKSDVYSFGVVLIELISSKPAVDISRSRDEINLSTLATKKIQESAIGELVDPCLGFDEDNEVNRMIVSVAELAFQCLQKDKELRPSMEEVLDELRRIESGNDGVVVVEEADIDGVGSSHSNVHPPPPPSAASPELDDIGLLKNTKHMSLMKNMKHPSSPNTVTDKWESISTTPNVSA 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01539 697 MobiDBLite consensus disorder prediction 634 656 - -
Car04g01539 697 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Car04g01539 697 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 19 696 IPR044652 -
Car04g01539 697 SUPERFAMILY Protein kinase-like (PK-like) 320 614 IPR011009 -
Car04g01539 697 ProSiteProfiles Protein kinase domain profile. 342 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01539 697 Gene3D Transferase(Phosphotransferase) domain 1 419 625 - -
Car04g01539 697 Gene3D Phosphorylase Kinase; domain 1 313 418 - -
Car04g01539 697 ProSitePatterns Protein kinases ATP-binding region signature. 348 370 IPR017441 GO:0005524
Car04g01539 697 Pfam Protein kinase domain 344 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01539 697 MobiDBLite consensus disorder prediction 671 697 - -
Car04g01539 697 SMART serkin_6 342 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01539 697 PANTHER WALL-ASSOCIATED KINASE-LIKE PROTEIN 19 696 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01539 Car-Chr4 15715683 15719288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01539 39 697 Receptor kinase-like Gene Family AT1G25390 45.701 4.62e-170 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Car04g01539 Pkinase 4.5e-49 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01539 04 15715683 15719288 Car04g01539 04 15715683 15719288 ECH