Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01521 ATGGGTTCTGCCAAACAAGTAGTTATAATAGGCCATAATAATAATATTTCACACGATTCTGGTAATGCTCGTCTTAACGAACTCGGTTACAAACAAGAACTCAAGCGTGACCTTTCGGTTCTATCAAATTTTGCGATTTCGTTTTCAATTATATCTGTGCTAACTGGAGTAACCACACTTTACAACACTGGTTTGACCTATGGAGGTCCTGTTTCAATTGTATATGGATGGATTATAGCTTCTTTTTTCACCATGCTTGTTGCACTTTCAATGGCTGAAATTTGTTCAGCTTTTCCAACTTCTGGTGGTCTTTACTATTGGAGTGCCAAACTTGCTGGTCCCAAGTGGGCCCCATTTGCCTCATGGATTACTGGCTGGTTCAATATTGTTGGCCAGTGGGCAGTGACAACAAGTGTAGATTTTTCACTTGCGCAGTTCATTCAGGTTATCATTCTTCTTAGTACGGGTGGAAAAAATGGTGGTGGTTATGAAGGATCTAAATATGTAACTATTACTTTCCATGCTGGAATTTTGCTCCTGCATGGTATAATAAACAGCCTTCCAATCTCATTGTTATCATTCTTAGGAGAGTTGGCTGCTTTCTGGAATGTTGTAGGTGTTTTTGTGCTTATGGTTATCATTCCATCTGTTGCAACGGAAAGAGCTAGTGCCAAGTTTGTTTTCACTCACTTCAATAGTGACAATGGGGAAGGAATCAATAGTAAACCCTATATATTTCTCTTGGGACTTCTAATGAGTCAGTTCACCTTATCAGGATATGATGCATCAGCTAATATGACAGAGGAAACCAAGGATGCAGATATAAATGGACCAAAAGGAATTATCAGTGCTGTTGGGATATCTATTATTGTCGGATGGGGTTACATTCTAGGGATTACCTTTGCTGTTACTGACATCCCTTACCTTTTGAATGAAAATAACGAGGCTGGTGGATATGCTATCGCCGAAGTATTTTATCTTGCATTTAAGAGAAGATATGGCAATGGATTTGGTGGCATTATTTGTTTGGGAATTGTTGCTGTTGCAATATTTTTCTGTGGTATGAGTTCAATTACCAGCAATTCAAGGATGGCTTATGCTTTTTCAAGAGATGGGGCTATGCCATTGTCATCATTGTGGCATCAAGTTAACAAGCAGGAGGTCCCCATATATACAGTGTGGCTTTCTGTTTTAATATCATTTTGCATGGCACTAACGTCTCTTGGAAGCATGGTGGCATTTGAGGCTATGGTGTCCATAGCAACCATTGGACTATATATTGCTTATGGATTACCTATCTTCTTTAGGGTGACATTAGCACAAAAGCGTTTTGTTAGAGGGCCTTTCAACTTGGGTCGTTACGGAGTTATTGTTGGTTGGATTGCAGTTCTTTGGGTGGTGACTATCTCTATATTATTCTCATTGCCTGTTTCCTACCCAATAACCATTGAGACACTTAACTACACACCTGTTGCTGTTGGATGTTTACTCCTTCTTGTACTTTCTTATTGGGTAATCAGTGGTAGACATTGGTTTAAAGGCCCTTTCACCACTATTATACAAAAGTGA 1569 0.3939 MGSAKQVVIIGHNNNISHDSGNARLNELGYKQELKRDLSVLSNFAISFSIISVLTGVTTLYNTGLTYGGPVSIVYGWIIASFFTMLVALSMAEICSAFPTSGGLYYWSAKLAGPKWAPFASWITGWFNIVGQWAVTTSVDFSLAQFIQVIILLSTGGKNGGGYEGSKYVTITFHAGILLLHGIINSLPISLLSFLGELAAFWNVVGVFVLMVIIPSVATERASAKFVFTHFNSDNGEGINSKPYIFLLGLLMSQFTLSGYDASANMTEETKDADINGPKGIISAVGISIIVGWGYILGITFAVTDIPYLLNENNEAGGYAIAEVFYLAFKRRYGNGFGGIICLGIVAVAIFFCGMSSITSNSRMAYAFSRDGAMPLSSLWHQVNKQEVPIYTVWLSVLISFCMALTSLGSMVAFEAMVSIATIGLYIAYGLPIFFRVTLAQKRFVRGPFNLGRYGVIVGWIAVLWVVTISILFSLPVSYPITIETLNYTPVAVGCLLLLVLSYWVISGRHWFKGPFTTIIQK 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01521 522 TIGRFAM 2A0304: amino acid permease 25 515 IPR004756 GO:0006865|GO:0016021
Car04g01521 522 PANTHER AMINO-ACID PERMEASE BAT1 HOMOLOG 13 519 - -
Car04g01521 522 Gene3D Amino acid/polyamine transporter I 32 513 - -
Car04g01521 522 PANTHER AMINO-ACID PERMEASE BAT1 13 519 - -
Car04g01521 522 PIRSF AA_transporter 24 515 - -
Car04g01521 522 Pfam Amino acid permease 38 493 IPR002293 GO:0016020|GO:0022857|GO:0055085
Car04g01521 522 ProSitePatterns Amino acid permeases signature. 68 99 IPR004840 GO:0006865|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01521 Car-Chr4 15475791 15481664 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01521 85 521 Organic Solute Cotransporters AT2G01170 74.600 0.0 647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01521 04 15475791 15481664 Car04g01521 04 15475791 15481664 ECH