Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01517 ATGGAGAAAGTTTGTGAATTCTGCAAAGCATTGAGGCCACTTGTTTACTGTAATGCTGATGCAGCATATCTTTGTCTATCCTGTGATGCAAAGGTCCATTGGGCAAATGAATTGTCCGGACGACACCTCCGGACCCTCGTGTGTAACTCATGTCGATGTCATCTTGCTTACGTTCAGTGCTTGGATCACAAAATGTTAATCTGTCGAGACTGTGATCAAAATCTGCACGGTAGTTCTTCACCGCATTGCAAACGAGCTGTTAACAGTTTCATGGGTTGTCCTTCTGCTATAGAGTTTGCAACACTCTGGGGATTTGAATTTAAGGAGATTGAAAAAAGTGTGAATCACAAGGATCAGTTTGCATCTAGTTCTTGTGTTTTTACGGATGTGAATGAGGTTCGAATCTCGGGAAAGCGTCACATTCAAACTAGCATCCCTTCAACCAAATTTGACAAGGAATCCAGCAGTCAACTAGGCCAGGTCTTGTACAGGGATCAAGAGAGGCAAACTATTCTGCAGCAGATTGTTGATTTAAAACGATTTCAACAAACTGAGGAGAGTAACCATTCTCCTTCAGTGTATGAAAAATTCAATCAGCAAGCACAAAAATCCCAAGATTTTGCTACTAATCATCCAGAGGAAGACAAACATATTGGGGAGCTAAATCCCGAAAGTTTCTGTTCGGCATTTTCTCAACTTGATAATATGTCTTCATCTAATTCAGTTATGGAACTTCCCTTGCATGGAGAGTTGTTTTGGACTTGCAAAAGTTCACTTCAAAGTAATCAGCTGTGGTCCCAAAATATTCAAGACCTGGGAATATGCGAAGAACTTGTTTGTCGAGATGATTTTAACATACCCGATGTCGACTTAACATTCCAAAACTTTGAGGAACTATTTGGAGGAGATCAAGATCCAATTAGAGTAATGTTTGGTGGCAAAGAAACCTCTTGCTCTTCTTTGGAGGATGATATATCAGTTGATAAGTCAGATATTGACAATCCAAGTGCAATGGAGGTCTGA 1023 0.4037 MEKVCEFCKALRPLVYCNADAAYLCLSCDAKVHWANELSGRHLRTLVCNSCRCHLAYVQCLDHKMLICRDCDQNLHGSSSPHCKRAVNSFMGCPSAIEFATLWGFEFKEIEKSVNHKDQFASSSCVFTDVNEVRISGKRHIQTSIPSTKFDKESSSQLGQVLYRDQERQTILQQIVDLKRFQQTEESNHSPSVYEKFNQQAQKSQDFATNHPEEDKHIGELNPESFCSAFSQLDNMSSSNSVMELPLHGELFWTCKSSLQSNQLWSQNIQDLGICEELVCRDDFNIPDVDLTFQNFEELFGGDQDPIRVMFGGKETSCSSLEDDISVDKSDIDNPSAMEV 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01517 340 CDD Bbox1_BBX-like 4 47 - -
Car04g01517 340 ProSiteProfiles Zinc finger B-box type profile. 43 87 IPR000315 GO:0008270
Car04g01517 340 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Car04g01517 340 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 339 - -
Car04g01517 340 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 339 - -
Car04g01517 340 SMART bboxneu5 1 47 IPR000315 GO:0008270
Car04g01517 340 SMART bboxneu5 48 87 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01517 Car-Chr4 15407508 15410522 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01517 1 307 C2C2-CO-like Transcription Factor Family AT1G68190 39.677 7.60e-65 207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01517 04 15407508 15410522 Car04g01517 04 15407508 15410522 ECH