LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Car04g01514	atgatgtatcatcatcagaatcagaatgagaatGGTTCGTTGGAACGCATGAGGATTAACGGAGACATTGGTTCAAATTCCCCCAATTCGATTAGACTTCTTGGAAGCCCTAGAGGAAATCACATGCCTGATAACTATGAAGATCTTCCTTTGGATTTCAACCATATTATTTTCACTTCTCTCGAAAAATATCTTCCTTCTCACGTCATTAACCTCTCTCGTGACCTCAAAGCTCATTACATGTCCAACATTCTTCTCCGTTATCTGCCTCACTCTGAACGCATTCGGACTCAAAAGCACAAGGAATACAGGCGAAAGATCATGTTAAATTATCCTCCGCTACATAAGGAGATATATACTATCCATAGTGAAAACTTTTTTGCACCGTCGTTTCTCAGAGCTATTAAAGAAAATACACCAGCGAGTTTTAGAAGTATAATGGCCGAGCCCGCCAGAGGAATTTATACGTTTGAAATGTTTCGACCACAGTTTTGTGAAATGTTGGTGTCTGAGGTGGATAATTTTGAACGGTGGGTCCATGAGACCAAATTCAGAATCATGCGACCTAATACAATGAATCAATATGGTGCTGTTCTTGATGATTTTGGTCTGGAAGCCATGCTTGATAGATTGATGAATGATTTCATAAGTCCTATAGCTCGAGTTTTTTTTAATGAAGTTGGTGGATCCACACTGGACTCGCATCATGGTTTTGTTGTTGAATATGGAACCAATAGGGATGTGGAACTTGGGTTCCACGTGGATGACTCAGAAGTGACCTTAAATATTTGCTTGGGAACACAATTTTCAGGTGGAGAACTGTTCTTCCGAGGTGTTCGATGTGATGAACATGTGAATACAGAGACCCAATCAGGGGAGATTTTCGATTATTCCCATGTTCCAGGACATGCTGTCCTTCATCGTGGTCGACACCGTCACGGTGCTAGACCTACAATATCTGGGAACCGGATCAATTTAATCCTCTGGTGTAGAAGTTCGGCGTTTAGAGAGATCAAGAAATATATGAGTGAATTTCCTAGCTGGTGTGGAGAATGCAGACGCAAGAAGAAGGAGAGGGAGCGCATATCGATTGCTGCCACCCAAGAGGAATTACTAAAGAGGGAACTTAAATCAGCCTCGTGA	1143	0.4077	MMYHHQNQNENGSLERMRINGDIGSNSPNSIRLLGSPRGNHMPDNYEDLPLDFNHIIFTSLEKYLPSHVINLSRDLKAHYMSNILLRYLPHSERIRTQKHKEYRRKIMLNYPPLHKEIYTIHSENFFAPSFLRAIKENTPASFRSIMAEPARGIYTFEMFRPQFCEMLVSEVDNFERWVHETKFRIMRPNTMNQYGAVLDDFGLEAMLDRLMNDFISPIARVFFNEVGGSTLDSHHGFVVEYGTNRDVELGFHVDDSEVTLNICLGTQFSGGELFFRGVRCDEHVNTETQSGEIFDYSHVPGHAVLHRGRHRHGARPTISGNRINLILWCRSSAFREIKKYMSEFPSWCGECRRKKKERERISIAATQEELLKRELKSAS	380

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Car04g01514	380	ProSiteProfiles	Fe(2+) 2-oxoglutarate dioxygenase domain profile.	233	332	IPR005123	-
	Car04g01514	380	PANTHER	2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED	28	378	-	-
	Car04g01514	380	PANTHER	2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2	28	378	-	-
	Car04g01514	380	SMART	p4hc	152	331	IPR006620	GO:0005506\|GO:0016705\|GO:0031418
	Car04g01514	380	Gene3D	q2cbj1_9rhob like domain	151	332	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Car04g01514	Car-Chr4	15334538	15339352	Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Car04g01514	04	15334538	15339352	Car04g01514	04	15334538	15339352	ECH