Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01510 ATGACTTCTGTTACTAATTTCACATATATTTCAGCTTCTTCTTTTCATGTAAAGTGTTGTTCCATGAAAGAAAACCACCATGACCAATTGAATAATAGTAGCATAAGAATGAATGGGAGTTTTAGGTCTCCAATTAAAGTTGAATCACTTAGTCAAACAGCTGAAGCTGCACCTACTATACTTGTTGAAAATGGTCAACGCCAAAACATTCCAACAAAGAAGCAATTGGTTGATCCTCATCGTCAAGCTCTCATTGTTGAAGGTGGTGTTGGTTATAGACAAACTGTTGTCATTAGGTCCTATGAAGTTGGTCCTGATAAAACTGCTACACTTGAAAGCATCCTCAATCTTCTTCAGGAAACAGCATTAAACCATGTATGGATGTCAGGACTACTGAGTGATGGGTTTGGAGCAACACATGGAATGATGAGGAACGATCTCATTTGGGTTGTATCAAGAATGCAAGTTCTCATTGATTATTATCCCATTTGGGGAGAGGTAGTAGAAATTGACACATGGGTTGGAGCATCGGGCAAGAACGGTATGCGACGCGACTGGCTCATAAGAAGTCAAGCCACAGGCCAAATTTTCGCTCGTGCAACAAGCACATGGGTGATGATGAACCGTAAAACAAGACGTCTTTCGAAAATGCCAGAAGAGGTGAGGGATGAACTTGCACCTTGGTTTATAGAGAAGCAAGCAATAAAAGAAGATTCTCCTGAAAAAATCCTCAAATTGAACAAAGAAGCAAAATACATGAATTCCGATTTGAAGCCCAAGAGAAGTGATTTGGACATGAACCAACATGTTAATAATGTAAAGTATCTAAGATGGATGCTTGAGACTATCCCTGACCAAATTCTAGAGAGCCACCAATTATCTGGTATAACATTAGAGTACAGAAGAGAATGTGGAAGTTCAGATATAGTTCAATCATTATGTGAACCTGAAGAAGATGAAATAGTACTTAATGGTATGGTTGAACCAAATTATTGTAAAAGTTTGTTTAATGGATTATCCTTAGCATCATCAGATATTATTAATGGCGGTGGAGTTTTGAGTTACCTTGAACAAAGGCCAATAAGGTATACACATCTATTACAAGCCAAAGGAGAAAAACAAAATGAAGAAATTGTTAGAGGAAAAACTATCTGGAAGAGGAAAATCACTACACTACCATTTTCTACCTAG 1191 0.377 MTSVTNFTYISASSFHVKCCSMKENHHDQLNNSSIRMNGSFRSPIKVESLSQTAEAAPTILVENGQRQNIPTKKQLVDPHRQALIVEGGVGYRQTVVIRSYEVGPDKTATLESILNLLQETALNHVWMSGLLSDGFGATHGMMRNDLIWVVSRMQVLIDYYPIWGEVVEIDTWVGASGKNGMRRDWLIRSQATGQIFARATSTWVMMNRKTRRLSKMPEEVRDELAPWFIEKQAIKEDSPEKILKLNKEAKYMNSDLKPKRSDLDMNQHVNNVKYLRWMLETIPDQILESHQLSGITLEYRRECGSSDIVQSLCEPEEDEIVLNGMVEPNYCKSLFNGLSLASSDIINGGGVLSYLEQRPIRYTHLLQAKGEKQNEEIVRGKTIWKRKITTLPFST 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01510 396 Pfam Acyl-ACP thioesterase 91 385 IPR002864 GO:0006633|GO:0016790
Car04g01510 396 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 11 389 IPR045023 GO:0006633|GO:0016297
Car04g01510 396 Gene3D Hotdog Thioesterase 83 392 - -
Car04g01510 396 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 90 237 IPR029069 -
Car04g01510 396 CDD 4HBT 92 208 - -
Car04g01510 396 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 252 389 IPR029069 -
Car04g01510 396 PANTHER ACYL-[ACYL-CARRIER-PROTEIN] HYDROLASE 11 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01510 Car-Chr4 15274434 15277200 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01510 76 396 Acyl Lipid Metabolism Gene Families AT1G08510 45.652 6.99e-96 291
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01510 04 15274434 15277200 Car04g01510 04 15274434 15277200 ECH