Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01506 ATGGAAAAGGGTCTGTTAGAGAAAGAAAGAGAGGGCGATTCAAGCGTAATAATAACATGGGGTGTGTTTGCTCAAGAGGTGAAAGATGTTGGTTTTCTAGCTTTGCCTATGGTTACTGTGACTTTGTCTCAGTATTTTCTACAAATTATTTCAATGACGATGGTTGGTCATTTGGGTAAGCTTGCTCTCTCTAGCACAGCTATTGCCATATCTCTTTGCGGTGTCACTGGTTTCAGTCTTCTTTTTGGAATGTCGTGTGCACTGGAAACTCAATGTGGGCAAGCATATGGTGCTAAGCAATATAGAAAGTTTGGGGTTCAAGTTTACACTGCTATTGTTTCTCTTATTATAGCTTGTCTTCCTCTCTCTCTGTTGTGGATCTACTTGGGGAAGCTATTGACTTTACTTGGTCAAGACCCTTTGATTTCACAAGAAGCTGGAAAATTTGCTGTGTGCATGATTCCTGCTCTATTTGCGTATGGAACGCTTCAGGCACTGGTTCGGTACTTTCTGATGCAAAGTTTGATAGTTCCTCTTGTTATAAGTTCATCTGTTACACTTTGCTTCCATGTACCTTTTTGTTGGTTGCTAGTTTTTAAATCTGGATTAGGTGGCTTAGGAGCTGCATTTTCTATTGGTACTTCATACTGGTTGAATGTTATTATACTTGGATTGTATATGAAATTCTCTGCTCATTGTGAAAAGACTCGGGTTCCGATTTCAATGGAGGCTTTCCTTGGAATAGGAGACCTTGAGTGGTGGTCGTTTGAGCTCCTAATCTTACTTTCGGGTTTTCTACCAAATCCACAGCTTGAAACTTCGGTCTTATCCATATGTTTATCAATCATCTCAACAATCTATACAATACCAGAAGCAACTGGCTCAGCAGCAAGCACTAAAGTTTCAAATGCATTAGGAGCTGGATGTTCACAAGCAGCGCGATTGTCAGTTTATGCTGCTATGACTATTGCAGTTTCTGAGGCTGTTTTGGTGAGTTCAACCATTTTCGCCTCTCGACGGGTTTTAGGTTATATATTTAGTGATGAGCAAGACGTCGTGGATTATGTCACAGAAATGGTTCCTCTGATAAGTCTATCTGTTATAATCGATAGTTTACACGGTACCCTTTCAGGTATTGCTAGAGGATGTGGTTGGCAGAACTTGGGAGCATATGTGAACCTTGGATCCTATTATGTTTTTGGAATTCCAATTGCTGTTATATTGGGTTTTTGGTTAGAGTTGAGAGGAAAAGGCTTGTGGATTGGTATACTTGTTGGTGCCTTCTGTCAAGCACTTTTGTTATTCCTTATAACAAGTTTTACAAACTGGGAAAAACAGGCAATTAAGGCACGAGAAAGGATATTTCAAGGAAGTTTTGCAGTAGAAGATAGATTAGCTTGA 1401 0.399 MEKGLLEKEREGDSSVIITWGVFAQEVKDVGFLALPMVTVTLSQYFLQIISMTMVGHLGKLALSSTAIAISLCGVTGFSLLFGMSCALETQCGQAYGAKQYRKFGVQVYTAIVSLIIACLPLSLLWIYLGKLLTLLGQDPLISQEAGKFAVCMIPALFAYGTLQALVRYFLMQSLIVPLVISSSVTLCFHVPFCWLLVFKSGLGGLGAAFSIGTSYWLNVIILGLYMKFSAHCEKTRVPISMEAFLGIGDLEWWSFELLILLSGFLPNPQLETSVLSICLSIISTIYTIPEATGSAASTKVSNALGAGCSQAARLSVYAAMTIAVSEAVLVSSTIFASRRVLGYIFSDEQDVVDYVTEMVPLISLSVIIDSLHGTLSGIARGCGWQNLGAYVNLGSYYVFGIPIAVILGFWLELRGKGLWIGILVGAFCQALLLFLITSFTNWEKQAIKARERIFQGSFAVEDRLA 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01506 466 TIGRFAM matE: MATE efflux family protein 36 420 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Car04g01506 466 CDD MATE_eukaryotic 26 449 IPR045069 GO:0042910|GO:1990961
Car04g01506 466 Pfam MatE 251 407 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Car04g01506 466 Pfam MatE 36 196 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Car04g01506 466 PANTHER MULTIDRUG RESISTANCE PROTEIN 5 452 - -
Car04g01506 466 PANTHER PROTEIN DETOXIFICATION 5 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01506 Car-Chr4 15253778 15256714 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01506 04 15253778 15256714 Car04g01506 04 15253778 15256714 ECH
Car04g01506 04 15253778 15256714 Car08g01645 08 26280101 26293408 ECH